Solanum stenotomum: 125857988
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Entry
125857988 CDS
T08385
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
sstn03013
Nucleocytoplasmic transport
sstn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125857988
03008 Ribosome biogenesis in eukaryotes
125857988
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125857988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125857988
03009 Ribosome biogenesis [BR:
sstn03009
]
125857988
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125857988
03036 Chromosome and associated proteins [BR:
sstn03036
]
125857988
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125857988
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125857988
Pre-60S particles
125857988
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125857988
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125857988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
125857988
NCBI-ProteinID:
XP_049393603
LinkDB
All DBs
Position
3:15660337..15676234
Genome browser
AA seq
1075 aa
AA seq
DB search
MAAEKLRDLSQPIDVSLLDATVAAFYGTGSKEERAAADHILRDLQNNPDMWLQVVHILSS
TQSLNTKFFSLQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEASLRRERLYISK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSVSHRTELIRATLATLHAFLSWIPLGYIFESTLLEI
LLKFFPMPSYRNLTLQCLTEVAALNFGDFYNEQYVKMYTIFMGQLQSVLPVNTNIPEAYA
NGSNEEQAFIQNLALFFTSFFKSHIRVLESSQENISALLLGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAAHHNLDNPAMTANLMGLQMPLLSGMNDGLGAQLMQRRQLYSGPMSK
LRLLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSNQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVVVQVGENEPFVSELLTTLPTTIADLEPHQIHTFYESVGQMIQAEPDPQKRDEYLQ
RLMELPNQRWNEIIGQARQSVDYLKDQDVIRAVLNILQTNTSAASSLGTYFLPQITLIFL
DMLNVYRMYSELISTSIAQGGPYASRTSIVKLLRSVKRETLKLIETFLDKAEDQPHIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEAAFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFAALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLN
LLLAMLKNFQNSEFANQFYRTYYLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCMVVML
SEPLWDASTVPVSYPNNVEFVREYTIKLLSTSFPNMTSAEVTQFVSGLFDSTNDLPTFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMRSIPGLIAPNEIQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagctgagagatttgagccagcccattgatgtttcgttgcttgacgct
actgttgctgctttctatggcaccggatctaaggaagagagagctgcagcggaccatatt
ttgcgtgatttgcaaaataacccagatatgtggcttcaagtggttcacattctatcgagc
acacaaagcctgaatactaagtttttctctttgcaggttctagaaggtgtaataaagtat
agatggaatgcattgcctgtcgaacaacgagatggaatgaaaaattatatttctgaagtt
attgtgaagctttccagtgatgaagcatctctccggcgggaaaggctgtatattagcaag
cttaacataattttggttcagattttgaagcacgagtggcctgcaagatggcgaagcttc
attcctgacttagttgcggctgcaaagacaagcgaaacaatatgtgaaaactgcatggcg
atattgaagcttctcagcgaggaggttttcgatttctcaaggggtgaaatgactcaacaa
aagatcaaggagctcaaacaatctttaaacagcgagtttcaactcatccatgagctatgc
ttgtatgtgctatcagtatcccacagaactgagctcatcagggctacgcttgctacactg
catgctttcctttcatggattccacttggctatatttttgaatcaacactgttggaaata
ctgcttaaatttttccccatgccatcttatcgcaatctaacacttcagtgtctaacagag
gttgctgcccttaattttggggatttttataacgaacagtatgtcaagatgtacaccata
ttcatggggcagttgcagagtgttcttccagttaatacaaacattccagaggcgtatgca
aatggaagcaacgaagaacaggcattcattcagaatctggctctgttttttacatcattt
tttaagtctcatatacgtgtgctagaatcatcacaagagaatataagtgccctcttgttg
ggacttgagtatcttattaatatctcgtatgtggatgatacagaggtttttaaggtttgc
ttggactactggaattccttagttcttgagctgtttgaagcagcacatcataatcttgat
aatcctgcaatgactgcaaacctgatggggcttcagatgccactgctttctggcatgaat
gatggtcttggagcgcaacttatgcagaggagacaactttattctggtccaatgtccaag
ttgaggttacttatgatatctcgcatggcaaaacctgaagaagttctcattgtcgaagat
gaaaatgggaacattgtccgtgaaacaatgaaggacaatgacgtccttgtgcaatacaag
atcatgagggaaactctgatctacttgtcacatcttgatcatgacgatactgaaaagcag
atgctgaagaaacttagcaaccaactcaatggcgaggactggtcgtggaacaatctaaat
acattatgttgggcaattggttccatatctgggtcgatggtggaggagcaggagaacaga
ttccttgtcatggtgatacgcgatttgcttaacctatgtgaaatcacgaaaggaaaagac
aacaaggccgtaattgcaagcaatataatgtatgttgttgggcaatatcctagatttttg
agagctcattggaagttcttgaagactgttgtgaacaaattgttcgagttcatgcatgaa
acacatcctggagtgcaggatatggcttgtgatacatttttgaaaattgttcagaaatgc
aagcgcaagttcgttgtagtccaggttggagaaaatgagccatttgtttcagaactttta
accactcttcccacaaccattgcagatttagaacctcatcagattcataccttctacgaa
tctgttggtcaaatgattcaagcagaacctgatccccaaaaaagagatgagtatctgcag
aggttgatggagcttccaaatcagagatggaatgaaattataggacaagcacggcaaagt
gtggactacctgaaagatcaagatgttattcgagctgttctaaatatattgcagacaaat
actagtgctgctagctcacttggaacttatttcttacctcaaattactctgatcttcttg
gacatgctcaatgtttatagaatgtacagtgagcttatatctacaagcattgcacaagga
gggccctatgcctcaaggacatccattgtgaaactcttgcgctcggttaaaagggaaaca
ttaaagcttattgaaacatttttggacaaggctgaagatcaaccacacatcggaaaacaa
tttgtgccgccaatgatggacccagttttaggtgactatgcaaggaatgtgcctgatgct
agggaatctgaagttctctcgctctttgctacaattataaacaagtacaagggtgctatg
attgaggatgtccctcgaatatttgaagctgctttccagtgtactctggagatgatcaca
aagaactttgaagattatccagagcatcggctcaagttcttctcattacttcgtgcaatt
gctactcattgttttgctgctttaatacggctgtcgagtgagcaattaaaacttgtcatg
gattctataatatgggcttttcggcacactgagaggaacattgctgaaaccgggcttaat
cttttgctggcaatgctgaaaaattttcagaattctgagttcgctaaccagttttatagg
acttactatttgacgatcgagcaagaaatttttgctgttctgacagatacgtttcataag
cctgggtttaaattgcatgtattggtgctacagcatttgttttgcatggtagttatgtta
tctgagccgctatgggatgcatcgacagtgcctgtttcatatccaaataatgttgaattt
gttcgcgaatacaccattaagcttcttagtacatccttccccaacatgacctctgctgaa
gtgactcaatttgtcagtgggctatttgattcaacaaatgaccttcccacattcaagaat
cacataagggacttccttgtgcaatcgaaagagttctctgctcaggacaataaggacctt
tatgccgaggaagcagctgctcagagagagagggaacgtcagcggatgcgttctattcct
ggtctaattgcacccaacgagatacaagatgaaatggtggattcatga
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integrated database retrieval system
