Solanum stenotomum: 125873057
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Entry
125873057 CDS
T08385
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125873057
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125873057
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125873057
03036 Chromosome and associated proteins [BR:
sstn03036
]
125873057
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125873057
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125873057
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125873057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
Adaptin_N
SCD
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
125873057
NCBI-ProteinID:
XP_049409869
LinkDB
All DBs
Position
8:complement(8130688..8139550)
Genome browser
AA seq
581 aa
AA seq
DB search
MSGIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGMFIPYVGGVEHAHVLLPPLEGLCSVEETCVREKAVESLCRIGSQMKES
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEPLKNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATIEQPHLKTDIMSMFETLTQDDQDSVRLLAVEDCAALGKLLEPKDCVA
QILPVIVNFAQDKSWRVRYMVANQLYELCEAVGPEGTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPEIAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPTWAMEHIIPQV
LDMINDPHYLYRMTILHAISLLAPVMGSEITCSKLLPVIIAASKDRVPNIKFNVAKVLQS
VIPIVEQSVVENTIRPCLVELSEDPDVDVRFFANQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtattgatgaaccattgtatcctattgcggttttgattgatgagttgaagaat
gaagacattcagctaagattgaattcaatccggcgattgtctaccatcgcccgtgctctt
ggtgaggagagaacacggaaagagttgattccatttctaagtgagaacaacgatgacgat
gacgaagttcttcttgcaatggccgaagagttgggcatgtttattccatatgttggagga
gttgaacatgcgcatgtattgcttccacccttggaaggtctttgtagtgttgaggaaact
tgtgttagagaaaaggcagttgagtcattatgcagaattgggtcccaaatgaaggaatcg
gatttggtggagtcatttattccacttgtgaagagactggctgctggagagtggttcact
gctcgagtttcctcctgtggattgtttcacattgcttatcctagtgctccagagccatta
aagaatgaactgagaaccatatatagccaactttgccaagatgatatgcctatggtgagg
agagctgctgctacaaatcttggaaagtttgctgcgactattgaacaaccccatctgaag
actgacatcatgtcaatgtttgagaccctgacacaggatgatcaagattctgtccgttta
ttggctgttgaggattgtgctgctttggggaagctgctggagcctaaagactgtgtagca
caaattcttcccgtcatagttaattttgcgcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactttatgaactttgtgaggcagttggaccggagggtaccaggacggat
ttggtccctgcctatgttcggctacttcgtgataatgaggctgaagtgcgtatagctgct
gctggcaaggtgactaagttctgccgtattttgagccctgagatagctatccagcatatc
cttccttgtgtaaaggaactatcatcagattcatcccagcatgttcgttctgctttggct
tcagttatcatgggaatggctcctattttaggaaaggatgcaactatcgagcagcttctc
ccaattttcctctctcttctgaaggatgagtttcctgatgttcgtttgaatattatcagt
aagcttgatcaagtgaaccaggtaattggaattgatttgctctcccaatcactgctgcca
gcaattgttgaacttgcagaggatagacactggagggttcggcttgctataattgagtat
atacctctattggctagtcagctgggggtcggtttttttgatgacaagcttggtgctctg
tgcatgcaatggctaaaagataaggtttactctattagagatgcagcagcaaacaatgtt
aagcgccttgctgaggaattcggtccaacatgggcaatggagcatataattccacaggtg
ttggatatgatcaatgacccacattatctttaccggatgaccatccttcatgcaatttct
cttcttgcccctgtcatgggctcagaaattacttgctccaaacttctgccagttataatt
gctgcatcaaaagacagggtaccgaatatcaagttcaatgtggctaaggtgttgcagtct
gttattccaatagttgaacaatctgttgtggagaacacaattcgaccgtgtttggttgaa
cttagcgaggacccagatgttgatgttaggtttttcgccaaccaagccctacaagcaacc
aagtga
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