Sphingomonas suaedae: FPZ54_04375
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Entry
FPZ54_04375 CDS
T07976
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssua03009
]
FPZ54_04375 (rimO)
Enzymes [BR:
ssua01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FPZ54_04375 (rimO)
Ribosome biogenesis [BR:
ssua03009
]
Prokaryotic type
ribosomal protein modification factors
FPZ54_04375 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDX25337
UniProt:
A0A518RCZ0
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All DBs
Position
complement(915872..917236)
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AA seq
454 aa
AA seq
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MATRLPEAPKVGMVSLGCPKNLVDSERILTKLRSDGYAMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEVIRARFPNVLAVTGAHQYEEVVGAVHDAAPM
PPNAFLNLVPDSGLKLTPRHYSYLKISEGCNHRCAFCIIPALRGDLVSRRPDAILREAEK
LVEAGTRELLVISQDTSAYGVDIRREPRMWKGEHVVPHMTDLARELGKIAPWVRLHYVYP
YPHVDQVIPLMAEGLILPYLDIPFQHASPSVLRTMRRPANEAKVLERLKNWRSIAPDITI
RSTFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEAVKEERY
ARIMEKTAAISAAKLQAKVGHTLEVIIDEVDGDGANARSQADAPEIDGTVFLRDAGHLKQ
GEIVAVEIEDADEHDLYGVPLPADGRVTARFPLP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgactccccgaagcccccaaggtgggcatggtgtcgctcggctgtcccaag
aatctggtcgacagtgagcgtatcctgaccaagctccgcagcgacggctatgccatgtcc
gccgactatgccggggcggacgtggtgctggtcaacacctgcggctttctcgacagcgcc
aaggaagaatcgctcgaagcgatcggcgaggcgattgcggaaaatggccgcgtcatcgtc
accggctgcatgggcaaggaggcggaggtcatccgcgcccgctttcccaatgtcttggcg
gtcacaggtgcgcatcaatatgaggaagtggttggggccgtccacgacgccgcgccgatg
ccgcccaacgcctttctcaacctcgtccccgacagcgggctcaagctcaccccgcgccat
tacagctatctgaagatttcggagggctgcaaccatcgctgtgccttctgcatcatcccc
gcgctgcgcggcgatctcgtcagccgccgccccgacgcgatcctgcgcgaggctgaaaag
ctggtcgaagcggggacaagggaattgctggtcatcagccaggacacgtccgcgtacggc
gtcgatatccgcagggaaccgcggatgtggaagggcgagcatgtcgtcccccatatgacc
gacctggcccgcgaactcggcaagatcgccccctgggtgcggctccactatgtctatccc
tacccccatgtggatcaggtcatcccgctgatggcagaggggctgatcctcccctatctc
gacatcccttttcagcacgccagcccgtccgtccttcggaccatgcgtcgcccggcgaac
gaggcgaaggtgctggagcggttgaagaactggcgcagcatcgcgccggatatcaccatc
cgctcgaccttcgtcgtcggctttcccggtgagaccgaggcggatttccaatatctgctc
gactggctcgacgaagcccaactcgaccgcgtcggcgcgttccgcttcgagccggtcgag
ggtgccgccgccaacgacctgcccggcgcggttcccgaagcggtcaaggaagaacgctac
gcccggatcatggagaagactgcggcgatcagcgcggccaagcttcaggcaaaggtcggt
cacacgctcgaagtgattatcgatgaggtcgatggcgacggtgccaatgcccggtcacag
gccgacgcgcccgagatcgacggaacggtgttcctgcgcgacgccggacatctgaagcag
ggcgaaatcgtcgcagtcgagattgaggacgccgacgagcacgatctgtacggcgtgccg
ctcccggcggatggacgggttacagccagattccctttaccgtga
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