Sphingomonas suaedae: FPZ54_16635
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Entry
FPZ54_16635 CDS
T07976
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua00540
Lipopolysaccharide biosynthesis
ssua01100
Metabolic pathways
ssua01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FPZ54_16635 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssua01005
]
FPZ54_16635 (rfaD)
Enzymes [BR:
ssua01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FPZ54_16635 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ssua01005
]
Core region
FPZ54_16635 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QDX28343
UniProt:
A0A518RLL1
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All DBs
Position
3484908..3485891
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AA seq
327 aa
AA seq
DB search
MILVTGGGGFIGSNVTAALAARGQRVIVCDWLETGDKWRNLEDVDLYDIVPPTLLNETLR
KHDDRISAIVHMGAISATTERDADRLVENNVRLTIDLWDWSIASGASFLYASSAAVYGDG
AQGFDDDWSVEALARLRPLNGYGWSKLVADRRFARDVAEGAPTPRHWAGLRFFNVYGTRE
EHKGSMRSVVSQITPRVTAGERVTLFRSHHPDYEDGGQLRDFVHVDDCVSVILWLLDHPE
ANGIFNLGTGQARSFRDLATSVFVALDRDPAIDFVDTPVEIRDRYQYFTQAEMGRLRAAG
YDRPFASLEEGVAGTVRDWTQRYGGNR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ctgattctggttacgggcgggggcggattcatcggctccaacgtcacggccgcgcttgcc
gcgcgcgggcagcgagtgatcgtctgcgactggctcgagacgggcgacaagtggcggaac
cttgaagatgtcgatctctacgatatcgttccgccgacgctgctgaacgaaacgctccgc
aagcatgacgatcgcatctcggcgatcgtgcatatgggcgcgatcagcgcgaccacggag
cgtgatgccgaccggctggtggagaataacgtccgtctgacgatcgacctttgggactgg
agcatcgccagcggcgcgagttttctctacgcatcgtccgcagcggtttatggcgacggc
gcgcaggggttcgatgacgactggagcgtggaggcgctcgcccggcttcgtcccctcaac
ggctatggctggagcaagctggtcgcggaccgccgcttcgcccgcgatgtggccgaaggc
gcgccgacgccgcgtcactgggccgggctgcgcttcttcaacgtctatggcacgcgggag
gagcataaggggtcgatgcgttcggtggtcagccagatcacgccgcgggtgactgcgggc
gagcgggttaccttgttccgctcgcaccatcccgattatgaagatggcggtcagctgcgc
gattttgttcatgtcgatgattgcgtgtcggtgatcctctggctgctcgatcatccggaa
gcgaacggtatcttcaacctggggaccggacaggcgcgcagtttccgcgatctcgcaacg
tcggtgttcgtcgcgctggaccgcgacccggcgatcgactttgtcgacaccccggtggag
atccgcgacaggtaccaatatttcacccaggcggagatggggcgcttgagagcggcggga
tatgaccgcccgttcgcctcgcttgaagaaggcgtggcggggaccgtgcgcgactggacg
cagcgctacggcgggaaccgctga
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