Shinella sumterensis: Q9314_05900
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Entry
Q9314_05900 CDS
T09417
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00190
Oxidative phosphorylation
ssum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Q9314_05900
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9314_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssum03019
]
Q9314_05900
Enzymes [BR:
ssum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
Q9314_05900
Messenger RNA biogenesis [BR:
ssum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q9314_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
PLDc
Motif
Other DBs
NCBI-ProteinID:
WLS10049
LinkDB
All DBs
Position
complement(1140044..1142170)
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AA seq
708 aa
AA seq
DB search
MASPERFINREFSWLQFNRRVLEETLNTAHPLLERVRFLSISAANLDEFFMVRVAGLEGQ
VRQGIAIRSPDGKTSAEQLDDILKEIDNLQMEQQASLAVLQQYLAKEDILIVRPVALTSD
DKVWLQQEFNQSIFPVLTPLSIDPAHPFPFIPNLGFSIGLQLESTMGKEPMTALLRLPVA
LDRFIRLPDAEGAIRYITLEDVVGLFIGRLFPGYIVRGSGTFRIIRDSDIEVEEEAEDLV
RFFETALKRRRRGSVIRIETDSEMPESLRRFVVGELNVPDNRVAVLPGLLALNTLSEITK
APRNDLRFEPYNARFPERVREHAGDCFAAIREKDMVVHHPYESFDVVVQFLLQAARDPDV
LAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVV
FGFIELKTHAKMSMVVRREEGRLRTYCHLGTGNYHPVTAKIYTDLSFFSCNPTIANDMAN
IFNFITGYGEPEAGMKLAFSPYTLRPRILRHIDEEIAHAKNGAPAAIWMKMNSLVDPEII
DALYRASQAGVEVDLVVRGICCLRPQVPGLSDNIHVKSIVGRFLEHSRIFCFGNGHGLPS
DKALVYIGSADMMPRNLDRRVETLVPLINRTVHEQVLSQIMLGNLIDNQQSYEILPDGTS
RRMEVQPGAEPFNAQHYFMTNPSLSGRGEALKSSAPKAIAGWQGRRKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccggagcgcttcatcaaccgggaattctcctggctccagttcaaccgccgc
gtccttgaagaaaccctcaatacagcccatccgctgctcgagcgcgttcgcttcctgtcg
atctccgcggccaatctcgacgagttcttcatggtgcgcgtcgcgggcctcgaaggccag
gtgcggcagggcatcgccatccgcagccccgacggcaagacttcggccgaacagctcgac
gacatcctgaaggagatcgacaatctccagatggagcagcaggcctcgcttgccgtgctc
cagcagtatcttgccaaggaagacatcctgatcgtgcgcccggtggcgctgacgagcgac
gacaaggtctggctccagcaggagttcaaccagtcgatcttcccggtcctgaccccgctg
tcgatcgatccggcgcacccgttcccgttcattcccaacctcggcttctccatcggcctc
cagctggaaagcacgatgggcaaggagccgatgacggcgctgctgcgcctgccggtcgcg
ctcgaccgcttcatccgcctgccggatgccgagggcgccatccgctacatcacgctggag
gatgtggtcggcctgttcatcggccggctcttccccggttacatcgtgcgcggctcgggc
accttccgcatcatcagagacagcgatatcgaggtggaggaagaggcggaagatctcgtg
cgcttcttcgagaccgcgctcaagcgccgccgccgcgggtcggtgatccgcatcgagacc
gattccgaaatgccggaatcgctgcgccgcttcgtggtcggcgaactcaacgtgccggac
aaccgcgtcgccgtcctgcccggcctgcttgccctcaacacgctgtcggagatcaccaag
gctccgcgcaacgacctgaggttcgagccctacaatgcgcgatttcccgaacgcgtccga
gagcacgccggagactgcttcgccgccatccgcgaaaaggacatggtcgtccaccacccc
tacgaaagcttcgacgtggtggtccagttccttctccaggctgcgcgcgatcctgacgtt
ctggcgataaagcagacgctctaccgcacctccaacgacagccccatcgtgcgcgcgctg
atcgatgccgccgaggccggcaagtcggtgacggcgctggtcgagctcaaggcccgcttc
gacgaggaggcgaacatccgctgggcgcgcgacctggaacgcgccggcgtgcaggtcgtc
ttcggcttcatcgaattgaagacccacgccaagatgtcgatggtggtgcggcgcgaggag
ggcaggctgcgcacctattgccacctcggcacgggcaactaccacccggtcacggcgaag
atctacacggacctgtccttcttcagctgcaacccgaccatcgccaacgacatggcgaac
atcttcaacttcatcaccggctatggcgaacccgaggccggcatgaagctcgccttctcg
ccctatacgctgcgcccgcgcatcctgcgtcacatcgacgaggagatcgcgcatgcgaag
aacggcgcgccggcggcgatctggatgaagatgaattctcttgtggatccggagatcatc
gatgcactttaccgcgccagccaggcgggcgtggaagtggatctggtggtgcgcggcatc
tgctgcctgcgcccgcaggtgccgggcctctcggacaatatccacgtcaagtccatcgtc
ggccgcttcctggagcattcccgcatcttctgcttcggcaacggccacgggcttccctcc
gacaaggcgctggtctatataggctccgcggatatgatgccgcgcaacctggaccggcgg
gtcgagacactcgtgcctctgatcaaccggacggtgcatgagcaggtactctcgcagatc
atgctgggcaatctcatcgacaaccagcagagctacgagattcttcccgacggaacgtcc
cggcgcatggaagtgcagcccggtgccgagccgttcaatgctcagcactacttcatgacc
aaccccagcctgtccggccggggcgaggccctgaagtcctcggcaccgaaggcgatcgcg
ggctggcaaggccgtcgcaagaagtaa
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