Shinella sumterensis: Q9314_13470
Help
Entry
Q9314_13470 CDS
T09417
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid transaminase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00330
Arginine and proline metabolism
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Q9314_13470 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssum01007
]
Q9314_13470 (rocD)
Enzymes [BR:
ssum01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
Q9314_13470 (rocD)
Amino acid related enzymes [BR:
ssum01007
]
Aminotransferase (transaminase)
Class III
Q9314_13470 (rocD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WLS07196
UniProt:
A0AA50D3S1
LinkDB
All DBs
Position
2680726..2681931
Genome browser
AA seq
401 aa
AA seq
DB search
MSPSTASLIETEHRLGAHNYKPLDVVLSRGEGVHVWDVDGNRYLDCLSAYSAVNQGHCHP
KILAAMVEQAQKLTLTSRAFRNDQLAHFYEEIAALTGSHKVLPMNSGAEAVETAVKAVRK
WGYEVKGVPEGQAEIIVCANNFHGRTMGIVGFSTDPDARVGFGPFAPGFRHVPFGDIDAF
RNAITENTVAFLIEPIQGEAGVLIPPAGYFTSVRELCTQHGITLILDEIQTGLGRTGKLL
AEEHEGIEADVTLVGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAIARAA
LKVLVEEDMIGNSARMGERFQAGLKGIRSNIIKDVRGRGLMLAVELDPAAGGARKYCEAL
KERGILAKDTHGDTIRIAPPLVITGDQVDWALEQFEAVLRT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgtcgaccgccagcctgatcgaaaccgagcatcgcctcggcgcccataactac
aagccgctcgacgtggtgctgtcgcggggcgagggcgtgcatgtctgggatgtcgacggc
aaccggtatctggattgcctttcggcctattcggcggtcaaccaggggcattgccacccg
aagatcctggcggcgatggtggagcaggcgcagaagctcaccttgacctcccgcgccttc
cgcaacgaccagcttgcgcatttctacgaagagatcgccgcactcaccggttcgcacaag
gtgctgccgatgaattccggtgcggaagcggtcgagaccgccgtcaaggcggtgcgcaaa
tggggctatgaggtaaagggcgtgccggagggccaggccgagatcatcgtctgcgccaac
aacttccatggccggaccatgggcattgtcggcttctccacggatccggatgcgcgcgtc
ggcttcggccccttcgcgccgggcttccgccatgtgcccttcggcgatatcgatgccttc
cgcaacgcgatcaccgaaaacacggtggccttcctcatcgagcccatccagggtgaggcg
ggcgtgctgatcccgccggcgggctatttcacgtcggttcgtgagctttgcacgcagcat
ggcatcacgctcatcctggatgagatccagacggggcttggtcgcaccggcaagctgctg
gcggaagagcatgagggcatcgaggcggatgtcacgctggtcggcaaggcgctgtccggc
ggtttctatccggtctcggcggtgctctcgaacagcgaggtgctgggtgtgctcaagccc
gggcagcacggctcgaccttcggcggcaatccactcgcctgcgccatcgcacgcgcggct
ttgaaggtgcttgtcgaggaagacatgatcggcaattccgcgcgcatgggcgaacgcttc
caggccgggctcaagggcatccgctccaatatcatcaaggacgtgcgcggccgcggcctg
atgctggcggtcgagctcgatcccgcggccggcggcgcgcgcaaatattgcgaggcgctg
aaggagcgcggcattcttgccaaggatacgcacggcgacacgatccgcattgccccgccg
ctcgtcatcaccggcgatcaggtcgattgggcgctggagcagttcgaggccgtgctgcgc
acctga
DBGET
integrated database retrieval system
