Serratia surfactantfaciens: ATE40_001820
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Entry
ATE40_001820 CDS
T06779
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur00730
Thiamine metabolism
ssur01100
Metabolic pathways
ssur01240
Biosynthesis of cofactors
ssur04122
Sulfur relay system
Module
ssur_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
ATE40_001820
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
ATE40_001820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssur03016
]
ATE40_001820
Enzymes [BR:
ssur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
ATE40_001820
Transfer RNA biogenesis [BR:
ssur03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ATE40_001820
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
AOE98063
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Position
386654..388102
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AA seq
482 aa
AA seq
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MKFIIKLFPEITIKSQSVRLRFIKILSTNIRNVLKQYDETLAVVRHWDHIEVRAKDENQR
PIIADALTRIPGIHHILEVEDRAYTDIHHIFEQTLEAYRAQLEGKTFCVRVKRRGKQAFN
SQDVERYVGGGLNQHIESARVNLTRPQVTVNLEIEDDKLMLVKRRLEGIGGYPVGTQEDV
MSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGGAAHEIGVKQVAHYLWNRFASSHKVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKLAREIGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EEEESHFDFSILDRVVSEAKNVDIRSIAEQAQEQVTEVETVAAFGADEVILDIRSNDEQE
EKPLQLEQVEVKALPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgcttg
cgctttatcaagattctctcgaccaatattcgcaacgtcctgaagcagtatgatgaaacg
ctggcggtcgtccgtcactgggatcatatcgaagttcgcgccaaagatgaaaaccagcgg
ccgatcattgccgacgcgctgacgcgcattcccggcatccaccatattctggaagtggaa
gatcgtgcttataccgatatccaccacatcttcgagcagacgctggaagcctaccgcgcc
cagctggaaggcaaaaccttctgcgtgcgcgtcaagcgccgcggcaagcaggcgttcaac
tcgcaggacgtggagcgctacgtcggcggcggtttgaatcagcatatcgagagcgcgcgc
gttaacctgacccgcccgcaggtcacggtaaacctggagatcgaagacgacaagctgatg
ctggtcaaacgccgtctcgaaggcatcggcggttacccggtcggcacccaggaagacgtg
atgtcgctgatttccggcggtttcgactcgggcgtgtccagctatatgctgatgcgtcgc
ggttgccgcgtgcacttctgcttcttcaacctgggcggcgccgcgcacgagatcggcgtg
aagcaggtggcgcattatctgtggaatcgcttcgccagctcgcacaaggtgcgcttcgtc
gccatcgacttcgagccggtggtgggtgagatcctggagaaagtcgacgacggtcagatg
ggcgtggtgctcaagcgcatgatggtgcgtgccgcttcgcaagtggccgaacgctacggc
gtgcaggcgctggtgaccggtgaggcgctggggcaggtctccagccagacgctgaccaac
ctgcgtctgatcgataacgcgtccgacaccctgatcctgcgtccgctgatttcgcacgat
aaagagcacatcatcaagctggcgcgcgaaatcggcactgaagacttcgccaaaaccatg
ccggaatattgcggcgtgatttcgaagagcccgacggtgaaagccgtcaaggccaagatt
gaagaggaagagagccacttcgatttcagcattctcgatcgggtggtgagcgaggccaag
aacgtcgatattcgctctatcgccgagcaggcgcaggagcaggtgaccgaggtggaaacc
gtcgcggcctttggtgccgacgaggtgatcctggatatccgttccaacgacgaacaggaa
gagaagccgctgcagctggaacaggttgaagtgaaagcgctgccgttctacaagctgagc
acccagttcggcgatctggatcagagcaaaacctatctgctgtactgcgagcgcggcgtg
atgagccgtctgcaggcgctgtacctgctggagcagggtttcagcaacgtgaaggtttat
cgcccgtaa
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