Streptococcus suis 98HAH33 (serotype 2): SSU98_1418
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Entry
SSU98_1418 CDS
T00515
Name
(GenBank) putative ABC transporter
KO
K18217
ATP-binding cassette, subfamily B, tetracycline resistant protein
Organism
ssv
Streptococcus suis 98HAH33 (serotype 2)
Pathway
ssv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SSU98_1418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssv02000
]
SSU98_1418
01504 Antimicrobial resistance genes [BR:
ssv01504
]
SSU98_1418
Transporters [BR:
ssv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SSU98_1418
Antimicrobial resistance genes [BR:
ssv01504
]
Gene variants
Tetracycline resistance genes
Transporters
SSU98_1418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
Zeta_toxin
AAA_15
AAA_22
RsgA_GTPase
AAA_29
MMR_HSR1
APS_kinase
Gtr1_RagA
nSTAND3
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ABP92576
LinkDB
All DBs
Position
complement(1351075..1352814)
Genome browser
AA seq
579 aa
AA seq
DB search
MTILGFLLKQIRRVKCLFIVAVGFYLLASTMVRLAPLLIQQAIDGPITDLSKGLPFDEAV
FLNQSVQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAYDVMQRLPISYFDDKPAGK
IATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYMNRSLGWLMLLLIPLYIGIQF
AYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFGQEERIMKEFEVTADKMRRADNK
IIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQDGVTAGKLFVYVNYIEGVFIALGA
LVQQFPNMLRSFETGKRLMALLEEELEDDCDRILEVEQGQVVFEHVNFSYEENRPVLKDI
TIRAEKGETVALVGHTGSGKSSIMNLLYRFYDPQEGCVLIDGKNIRDYSRESLRSHMGIV
LQDPYLFTGTIASNVSMNEEEADRTRIMQALEKVGAGPMLSRLEKGIDEPVVEKGAAFSS
GERQLIAFARTLYSDPKILILDEATSHIDTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQ
NADQILVLDQGRIIEHGKHEELVARGGVYAQMHEIQAKV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactattttaggttttttattaaaacaaatccgtcgagtcaagtgtctatttatagta
gctgtcggcttctatctattggcttcgaccatggttcgattggctcctctgctgattcag
caggcgattgatgggccgattacggatttgagcaagggtttgccttttgatgaagctgtt
ttcttaaaccagtcagttcaatacatgggaatgattattctgggagctattggcttctac
ttatctatgcgtttactcatgcattgcgccaatcgtattgctgaaaatctacgtaatcaa
gcctacgatgttatgcaacggttgcctatttcttattttgatgataagcccgctggaaaa
attgcaactagaattgtcaatgatacagaaactctgcggacacaattttatgggacctta
gttaatgcctttaacaatattgttcgtttgctctttacatacggtgtcctattttatatg
aataggagtcttggttggctgatgttactcttgataccactctatatcggtattcaattt
gcttacaagaaaatgacagacaagccgatgaaggatttttatgatgcaaggagtgacgtc
aatacgcaggtgaatgagaccatgaatggtgcaagtttgattcaactttttggacaagaa
gagcgcatcatgaaagaatttgaagtgactgctgacaagatgcgtcgggcagataataag
attatctgggcccagtctcttgccacgtggaatctgagtggttttctgcaaaatttggtc
attgctgcgattttaacggtagtcggctatcaatttcttgcgggacaggatggagttaca
gctgggaaactctttgtttatgtcaactatatcgaaggagtcttcattgctttgggagcg
ctggttcaacagttcccaaatatgcttcgctcgtttgaaacaggtaagcgtctaatggcc
cttctagaagaagagctggaggacgactgtgatcgtattttggaagttgaacaagggcaa
gtcgtgtttgaacacgtgaactttagctatgaagaaaacagaccagttttgaaagatatt
accattcgagcagaaaaaggagaaacagttgctctggttgggcatactgggtctggtaag
tcttctattatgaatctcctctatcgtttctatgatccacaggagggatgtgtactgatt
gatgggaaaaacatccgtgattattctcgtgaaagcctgcgcagtcacatggggattgtt
ttgcaagatccctatctctttacagggacgattgccagcaatgtttccatgaatgaagag
gaagcagatagaacaagaatcatgcaggcgctagaaaaagttggtgcagggcctatgcta
tctcgcttagagaaagggattgatgaaccggttgttgagaagggggcggccttttcaagt
ggggaacgtcaattgattgcctttgcgcggacactctactctgatcctaaaattctgata
ttggatgaagcaacttctcatattgatacggagacggaagaaattatccaacatgccatg
gaagtggtgaaagaaggtcggacaacctttattattgctcaccgactttctaccattcaa
aatgcagaccagattcttgtcttagatcaaggtcgaattattgaacatgggaagcatgaa
gaattggttgcacgtggtggagtatatgctcaaatgcatgagattcaagcaaaggtgtaa
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