Sphingobium sp. SYK-6: SLG_00740
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Entry
SLG_00740 CDS
T01622
Symbol
sucB
Name
(GenBank) 2-oxoglutarate dehydrogenase E2 component
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00020
Citrate cycle (TCA cycle)
ssy00310
Lysine degradation
ssy00380
Tryptophan metabolism
ssy00785
Lipoic acid metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
ssy01210
2-Oxocarboxylic acid metabolism
Module
ssy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SLG_00740 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
SLG_00740 (sucB)
00380 Tryptophan metabolism
SLG_00740 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SLG_00740 (sucB)
Enzymes [BR:
ssy01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SLG_00740 (sucB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
GCV_H
HlyD_3
SAPS
RnfC_N
HlyD_D23
EKR
Motif
Other DBs
NCBI-ProteinID:
BAK64749
NITE:
SLG_00740
UniProt:
G2IIR9
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All DBs
Position
71393..72667
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AA seq
424 aa
AA seq
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MATEVKVPTLGESVTEATVGQWLKKPGEAVKADEPIASLETDKVAIEVPSPVSGVLGELL
VKEGDTVNVGAVIATIEDGGAPAAKAASAAPAPAKAEAAPAPAATPAPAAPAPAAAPAAE
SESASGPITLSPAVRRLVLEHGLDPSRITGTGKDGRLTKDDVLAAIAAGTAVAAAPAGAS
PAAAAAPASGPSREQERVKMTRLRQTVARRLKEAQNNAAILTTFNDVDMTAVIEARAKYK
DLFEKKHGIRLGFMGFFVKAACMALKDIPGVNAQIEGDEIVYNNFCDISVAVSAPNGLMV
PVIRNAESMSIAEIEKTIADFGKRAKEGSLSMADMAGGTFTISNGGVFGSLLSTPIINPP
QSGVLGLHRIEERPVVRNGQIVARPMMYLALSYDHRLIDGREAVTFLVAMKNAIEDPTRL
LIDL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaagtgaaagtgcccacgctgggcgaatcggtcaccgaggcgaccgtcggc
cagtggctgaagaagcccggcgaagccgtgaaggccgacgaaccgatcgcgagcctggaa
acggacaaggtcgccatcgaggtgccttcgcccgtgagcggcgtgctcggtgaactgctc
gtcaaggaaggcgacaccgtgaatgtcggcgcggtcatcgcgacgatcgaggacggcggg
gccccggcggccaaggccgccagcgcagcgccggccccggcgaaggccgaagcagcgcct
gcgcctgcagcaacgcctgcgcccgcagcaccggcacccgccgccgcccccgcggcggaa
tccgagagcgcatccgggccgatcacgctgtcgcccgccgtgcgccgtctcgtcctcgag
catggcctcgaccccagccggatcaccggcaccggcaaggatggccgcctgaccaaggat
gacgtgctcgcggccatcgccgccggcaccgccgtcgcggctgcccccgcgggcgccagc
ccggccgcggccgctgcgccggcctccggtccttcccgcgagcaggagcgcgtgaagatg
acgcgcctgcgccagaccgtcgcccggcgactgaaggaagcgcagaacaacgccgccatt
ctcacgaccttcaacgatgtcgacatgaccgccgtcatcgaggcgcgcgcgaagtacaag
gacctgttcgagaagaagcacggcatccgcctcggcttcatgggcttcttcgtgaaggcc
gcgtgcatggcgctcaaggacattccgggcgtcaacgcgcagatcgagggcgacgagatc
gtctacaataatttctgcgacatctcggtcgcggtttccgcgcccaatggcctcatggtg
ccggtgatccgcaatgccgagagcatgagcatcgcggagatcgaaaagacgatcgccgat
ttcggcaagcgcgccaaggaaggctcgctttccatggcggacatggccggcggcactttc
accatctccaatggcggcgtgttcggcagcctgctgtccacgcccatcatcaatccgccc
cagtccggcgtgctcggcctgcaccgcatcgaggagcgcccggtcgtcaggaacggccag
atcgtggcgcggccgatgatgtatctggcgctgagctacgaccatcgcctgattgacggg
cgcgaggccgtgaccttccttgtcgcgatgaagaatgcgatcgaggatcccacccggctg
ctgatcgacttgtaa
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