Sphingobium sp. SYK-6: SLG_37530
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Entry
SLG_37530 CDS
T01622
Name
(GenBank) protocatechuate 4,5-dioxygenase alpha chain
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00362
Benzoate degradation
ssy00624
Polycyclic aromatic hydrocarbon degradation
ssy00627
Aminobenzoate degradation
ssy01100
Metabolic pathways
ssy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SLG_37530
00627 Aminobenzoate degradation
SLG_37530
00624 Polycyclic aromatic hydrocarbon degradation
SLG_37530
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
SLG_37530
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Gene cluster
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Motif
Pfam:
LigA
Terminase_4
BacteriocIIc_cy
PA28_alpha
Motif
Other DBs
NCBI-ProteinID:
BAK68428
NITE:
SLG_37530
UniProt:
G2IR62
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Position
complement(4042241..4042615)
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AA seq
124 aa
AA seq
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MNMTVDTASTKRSRTIPGTPLFDGDAASRGYALNAMCYSFNDAANREAFRADEEAYCARF
GLTPAQRDAVAARDVLAMIAAGGNIYYLAKLAGIFGLNVQDVGAQQTGMTVEAFKQKLLQ
EAEN
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgacggtcgacaccgcttcgacgaagcgaagccggaccatcccgggcacgcct
ttgttcgacggcgatgccgcttcgcgcggctatgccctcaacgccatgtgctattccttc
aatgacgcggcgaaccgcgaggccttccgcgccgatgaggaggcctattgcgcccgcttc
ggcctgacgcccgcgcagcgcgacgccgttgccgcgcgcgatgtgctcgccatgatcgcg
gcgggcggcaacatctactatctcgccaagctggccggcatcttcggcctcaacgtgcag
gatgtgggcgcgcagcagaccggcatgacggtcgaggcgttcaagcaaaaactccttcag
gaagcggagaactga
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