Streptomyces tanashiensis: LDH80_11675
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Entry
LDH80_11675 CDS
T08718
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
staa03009
]
LDH80_11675 (rimO)
Enzymes [BR:
staa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LDH80_11675 (rimO)
Ribosome biogenesis [BR:
staa03009
]
Prokaryotic type
ribosomal protein modification factors
LDH80_11675 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UZX21338
LinkDB
All DBs
Position
complement(2647053..2648558)
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AA seq
501 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVENAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISNRLQTIL
NGGSVEAHTPRDRRKLLPLSPVERQEAAATVALPGHGSVDAPESVPSDLPEGLAPASGPR
APLRRRLDTSPVASVKLASGCDRRCSFCAIPSFRGSFVSRRPSDVLNETRWLAEQGVKEV
MLVSENNTSYGKDLGDIRLLESLLPELASVDGIERVRVSYLQPAEMRPGLIDVLTSTEKV
VPYFDLSFQHSAPDVLRAMRRFGDTDRFLELLETIRSKAPTAGARSNFIVGFPGETEADF
AELERFITHARLDAIGVFGYSDEDGTEAATYEHKLDQDVVDERLAHLSRLAEELTAQRAE
ERIGETLEVLVESESDDEDEEGGWIGRAAHQAPETDGQVLLLTTDGGAGPGLAPGRMVRA
KVVGTEGVDLVAECLFEEAGR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgagaacgccgaa
gaagcggacgtcgccgtcgtcaacacctgcggattcgtcgaagccgccaagaaggactcc
gtcgacgccctgctcgaagccaatgatctgaaggaccacggcaggacccaggccgtcgtc
gccgtcggctgcatggccgagcggtacggcaaggagctcgccgaggccctcccggaggcc
gacggtgtcctcggcttcgacgactacgccgacatctccaaccgcctgcagaccatcctc
aacggtggcagtgtcgaggcccacaccccgcgtgaccggcgcaagctgctgccgctgtcg
cccgtggagcgccaggaggccgccgcgaccgtggcgctgccgggacacggctccgtggac
gcccccgagagcgtgcccagcgaccttcccgagggcctcgcgcccgcctccgggccgcgc
gcgccgctccgccgccgcctggacaccagccccgtcgcctccgtgaagctggcctccggc
tgcgaccgccgctgttccttctgcgccatcccctccttccgcggctccttcgtctcgcgc
cgtccctcggacgtgctgaacgagacgcgctggctcgccgagcagggcgtcaaggaggtc
atgctggtctccgagaacaacacctcctacggcaaggacctcggcgacatccggctcctg
gagagcctgctgcccgagctggcctcggtggacggcatcgagcgcgtccgcgtcagctac
ctccagccggccgagatgcgccccggcctgatcgacgtcctcacgtcgaccgagaaggtc
gtgccctacttcgacctgtccttccagcacagcgccccggacgtgctgcgcgccatgcgc
cgcttcggtgacaccgaccgcttcctggagctcctggagaccatccgctccaaggccccc
acggccggtgcccggtccaacttcatcgtcggcttccccggcgagaccgaggcggacttc
gccgagcttgaacgcttcatcacccacgcgcgcctcgacgccatcggcgtcttcggctac
tccgacgaggacggcaccgaggccgccacgtacgagcacaagctcgaccaggacgtcgtc
gacgagcggctcgcccacctctcccggctcgccgaggagctcaccgcgcagcgcgcggag
gagcggatcggagagaccctggaagtactcgtcgagtccgagtcggacgacgaggacgag
gagggcggctggatcggccgcgcggcccaccaggcgcccgagaccgacggacaggtgctg
ctgctcaccacggacggcggtgcgggccccggcctcgccccgggccgtatggtcagggcg
aaggtcgtcggcacggagggcgtcgacctcgtggccgagtgtcttttcgaggaggcgggc
agatga
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