Streptococcus pasteurianus: SGPB_0195
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Entry
SGPB_0195 CDS
T01524
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03030
DNA replication
stb03430
Mismatch repair
stb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGPB_0195 (polC)
03430 Mismatch repair
SGPB_0195 (polC)
03440 Homologous recombination
SGPB_0195 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stb03032
]
SGPB_0195 (polC)
03400 DNA repair and recombination proteins [BR:
stb03400
]
SGPB_0195 (polC)
Enzymes [BR:
stb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGPB_0195 (polC)
DNA replication proteins [BR:
stb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGPB_0195 (polC)
DNA repair and recombination proteins [BR:
stb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGPB_0195 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
HHH_3
DEDDh_C
Zn-ribbon_8
YhfH
Motif
Other DBs
NCBI-ProteinID:
BAK29329
UniProt:
F5X4I9
LinkDB
All DBs
Position
203066..207460
Genome browser
AA seq
1464 aa
AA seq
DB search
MSELFKKLMEQIDMPLDMRQSSAFSSADIREVKVHSVSRLWEFHFSFAEILPIEIYRELS
YRLVNTFKQADIRVTFDIQAETVDFSQPLLQTYYEEAFEHAPCDSTSFKASFSKLKVSYD
GTKLLIEAPAFVNNDHFRKNHLPNLARQFEAFGFGKLTIDMISDEAMTQALREDFTSNRE
AMVEKAVQENREAVKSLEASMPPDEETPKIKFDFKERAKQRRAGFENAEITPMVEVTTEE
NQIVFEGMVFDVEKKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELKKYDMIAKGAWLR
VRGNVENNNFTHALTMNVQDVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPTVEEL
IDTAAKWGHKAVAITDHGNVQSFPHGYHRARKNGIKAIFGLEANIVEDKVPIAYNPQDIE
LNEATYVVFDVETTGLSAVNNDLIQIAASKMYKGNIVEQFDEFINPGHHLSAFTTELTGI
TDNHVRNAKPIEEVLQMFQNFCQDTVLVAHNATFDVGFMNANYERHGMPIITQPVIDTLE
FARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEARENHSLANMMD
LNTKLVAEDSYKKARVKHATIYVQNQTGLKNIFKLVSLSNVKYFEGVARIPRTVLDAHRE
GLLLGTACSEGEVFDAVLSSGVDAAVKVAKYYDFIEVMPPVLYAPLLAQGTIKDEEGIRQ
VIRDLLEVGRRLNKPVLATGNVHYIEPEDEIYREIIVRSLGQGAPINRPIGRGENAQPAP
LPKAHFRTTNEMLDEFAFLGEDVAYQIVVKNTNDFADRFEEVEVVKKDLYTPFLEKSEER
VAEMTYQRAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVIRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSVGSGYDLPDKDCPECGTRYK
KDGHDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYGKFYPEAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDLSAEWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIPADDPDVMAL
FSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGMWLKISDEERNG
YIEAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHYPIYYYCAYFSIRA
KAFDIKTMSAGLDAVKERMADISNKRKNNEASNVEIDLYTTLEIVNEMLERGYKFGQLDL
YRSDAIEFIIDGDTLIPPFVAMDGLGENVAKQIVKARTEGEFLSKMELRKRGGVSATLVE
KMDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattatttaaaaaattgatggagcaaatcgatatgccgcttgacatgcgacaa
tcttctgctttttcatctgcagatattcgtgaagttaaggtacattctgtatctcgcctc
tgggagttccatttttcatttgcggaaattttgccaattgaaatctatcgtgaattgtct
tatcgattggtgaacacttttaaacaagcggatatcagagtgacttttgatattcaggca
gaaactgtcgatttttcacaacctttattgcaaacctactatgaagaagcttttgagcat
gctccgtgtgatagcaccagtttcaaggcttcttttagcaaattgaaggtttcttatgat
ggtaccaaattattgattgaagcaccagcatttgttaataatgaccattttcgcaaaaat
catctacctaatctagcgcgtcagtttgaagcgtttggttttggcaagcttaccatagac
atgatttctgatgaagcgatgacgcaagcattacgagaagattttacgtcaaatcgcgaa
gctatggtggaaaaagcggtgcaagaaaatcgtgaggcggttaaatctttggaagcctct
atgcctccagatgaagaaacaccaaaaattaaatttgattttaaagaacgtgccaaacag
cgccgtgcaggttttgaaaatgccgaaatcacaccaatggttgaagtcacaacagaagaa
aaccaaattgtttttgaggggatggtttttgacgttgagaagaaaacaactcgtacagga
cgtcacattattaattttaaaatgactgactacacatcaagttttgccatgcagaaatgg
gcaaaagatgatgatgagttgaaaaaatacgatatgatcgccaaaggggcatggcttcga
gttcgtgggaatgttgaaaataataatttcacccatgcattgaccatgaatgtacaagat
gtcaaagagattgttcatcatgaccgcaaggatttaatgccagaaggtcaaaaacgtgtg
gaattccatgcccatacgaatatgtcaaccatggatgctttgccaacggttgaagaatta
attgatacagcggcgaagtgggggcacaaggctgttgctattactgaccacggcaatgtg
caaagtttcccacacggttatcacagagcacgtaaaaatggtattaaggcgatttttggt
ttagaggctaatatcgttgaggacaaagtgccgattgcctacaatcctcaagatattgag
ttaaacgaagctacctacgtcgtatttgacgtggaaacgactgggctttctgcggtcaat
aatgatttgattcagattgcggcttcaaaaatgtacaagggaaatattgttgagcagttt
gatgagttcatcaacccaggtcatcatttatcagcttttacaacggaattgactggtatt
acggataatcatgttcgcaatgctaaaccgattgaagaagtccttcaaatgttccaaaat
ttttgtcaggatactgtgctagttgcccacaatgcaacctttgacgttggctttatgaat
gccaattatgaacgtcatggcatgccaattattacacaacctgtcattgataccttggaa
tttgctcgaaatctctatccagaatacaaacgtcatggtttgggaccattgaccaaacgt
ttccaagtttcgctagaacaccatcatatggcgaactatgatgcggaagcaacggggcgc
ttgctctttattttcctgaaagaagcacgtgaaaaccacagtttagctaacatgatggat
ttgaatacgaaattagttgctgaggattcttacaagaaagcacgtgtcaaacacgcgacg
atttatgttcaaaaccaaacaggtttgaaaaatattttcaaactcgtcagcctttctaat
gtcaaatattttgaaggtgtagctcgcattccaagaacggttcttgacgctcaccgtgaa
gggcttttgctaggaacagcctgctcagagggcgaagtttttgatgcggtcttatcttca
ggggtagatgctgcggttaaagtagcgaaatattatgatttcatcgaagttatgccacca
gtgctttacgctccgctattggcgcaaggaacaatcaaagatgaagaaggtattcgacaa
gtcatccgagatttgcttgaggttggacgtcgtctgaacaagcctgttttggcgactggg
aatgtccattatatcgagcccgaagatgagatttaccgtgaaatcattgtccgtagttta
gggcaaggggcaccgattaaccgtccgattggtcgtggtgaaaatgcccaacctgctccg
ttaccaaaagcgcatttccgtacaaccaatgaaatgttagatgaatttgcctttcttggc
gaagatgtcgcgtatcaaattgttgttaagaataccaatgattttgctgaccgtttcgag
gaagtcgaggttgttaagaaagacttgtacacacctttccttgaaaaatcagaagaacgt
gtcgctgaaatgacctatcaaagagcctttgaaatctatggtaatccacttcctgatatc
atcgatttacgtattgaaaaagaattaacgtcaattttggggaatggctttgccgtgatt
tacttggcgtcacagatgctggttatccgttccaatgagcgtgggtacttggtaggttcg
cgtgggtctgttgggtcaagttttgtggcaaccatgattgggattaccgaagttaaccca
atgccaccacattatgtctgtccaaattgtcagcattcagaattcatcaccgatggttct
gtcggttctggttatgatttgcctgacaaggattgcccagaatgtggcacacgttacaag
aaagatggacacgatattccgtttgaaaccttccttggttttgatggcgacaaggttccc
gatatcgatttgaacttctctggtgatgaccaaccgtcagctcacttggacgttcgtgat
atttttggtgaacaatacgcctttcgtgctggaaccgtaggtacggtggcagaccgtact
gcttacggatttgttaaaggttacgagcgtgattatggcaaattctatccagaagcagaa
gtggaacgcttggcacaaggtgcagctggtgtcaaacggacgacaggacagcacccagga
gggatcgtcgttattccaaactacatggatgtttacgattttacccctgttcaataccca
gccgatgatttgtcagcggaatggcagaccacgcactttaacttccatgatatcgatgaa
aacgtcttgaaactcgatattctcggtcatgatgatccgaccatgattcgtaaattgcag
gatttatctggtatcgatcctaaggatattccagctgatgacccagacgttatggcgctt
ttctcaggcacagaagtgcttggtgtcacccctgaacaaatcggaacgccgacaggaatg
cttggtattccagaatttgggacaaactttgttcgtggtatggttgaagaaactcaccca
acaacatttgccgaattgcttcagttatcagggctttctcatggtaccgacgtttggcta
ggaaatgctcaagacttgattaaggaaggaattgctacgctgaaaaccgttatcggttgt
cgtgacgacatcatggtttacctcatgcacgcaggtttggagccaaaaatggcctttact
attatggaacgtgtgcgtaagggaatgtggcttaaaatctctgacgaagaacgtaatgga
tacattgaagctatgcgagaaaataatgtgcccgactggtacattgaatcttgtggtaaa
atcaagtacatgttccccaaagcccatgcggcagcctacgttttaatggcgcttcgtgta
gcttactttaaagtacattatccgatttactactattgtgcttatttctcaatccgtgct
aaggcctttgacattaagacaatgagtgctgggcttgatgcggtgaaagaacgcatggct
gatatttctaataagcgtaagaataacgaagcttcaaatgttgaaattgatttatacacc
acacttgaaattgtcaatgaaatgctcgaacgtggttataaatttggtcaacttgacctt
taccgtagtgatgcaatcgagtttatcatcgacggtgatactcttattccaccgttcgta
gcgatggacggtcttggtgagaatgttgctaagcaaattgttaaagcacgtacagaagga
gaattcctctcaaaaatggaactccgcaaacgtggtggcgtttcagccacattagttgaa
aaaatggacgaaatgggaatcctcggcaatatgccagaagataaccaattaagtctattt
gatgatttcttttaa
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integrated database retrieval system
