Streptococcus thermophilus CNRZ1066: str0133
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Entry
str0133 CDS
T00212
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
stc
Streptococcus thermophilus CNRZ1066
Pathway
stc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
str0133 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stc03021
]
str0133 (rpoE)
03400 DNA repair and recombination proteins [BR:
stc03400
]
str0133 (rpoE)
Transcription machinery [BR:
stc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
str0133 (rpoE)
DNA repair and recombination proteins [BR:
stc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
str0133 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
GM130_C
Motif
Other DBs
NCBI-ProteinID:
AAV61748
UniProt:
Q5M1S8
LinkDB
All DBs
Position
150664..151245
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AA seq
193 aa
AA seq
DB search
MELDVFAGQEKSELSMIEVARAILETRGRDKEMYFNDLVNEIQNYLEKSDADIRSSLPFF
YSDLNTDGSFIPLGDNKWGLRSWYAIDEIDEEVITLEDIDENAPKRKNKKVNAFMDGDED
AIDYNDDDPEDENFTPSSAILEYDNDNEDDENAEVESYDSELNEIIPDDDLDDVELSEED
DDDDDDYEDETND
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttggaactagacgtatttgctggacaagaaaaaagtgaattatcaatgattgaagtggcc
cgtgctatcttagaaacacgtggtcgtgataaagaaatgtatttcaacgatttagtcaat
gaaattcaaaattacttagaaaaatcggatgccgatatccgtagttctttgccattcttt
tattcagatttgaatacggatggaagtttcattccactaggtgataacaaatggggcttg
cgttcatggtatgctattgatgaaatcgatgaagaggttatcacattggaagatattgat
gaaaatgcaccaaaacgtaaaaacaagaaagtaaatgccttcatggatggtgatgaagat
gccatcgactataatgatgatgatccagaagacgagaactttacaccttcttctgctatt
cttgaatatgacaatgataacgaagatgatgagaatgccgaagtggaatcttatgattct
gagttgaatgaaattattccagatgacgatttagatgatgttgagttgtctgaagaagat
gacgatgacgatgatgactatgaagatgagacaaacgactaa
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