Stenotrophomonas sp. WZN-1: CCR98_02875
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Entry
CCR98_02875 CDS
T04963
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00521
Streptomycin biosynthesis
sten00523
Polyketide sugar unit biosynthesis
sten00541
O-Antigen nucleotide sugar biosynthesis
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01250
Biosynthesis of nucleotide sugars
Module
sten_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CCR98_02875 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCR98_02875 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCR98_02875 (rfbD)
Enzymes [BR:
sten01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CCR98_02875 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Lipase_GDSL_2
NAD_binding_3
3Beta_HSD
NAD_binding_10
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
ARZ73168
UniProt:
A0A1Z2LG25
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Position
623363..624256
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AA seq
297 aa
AA seq
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MTVLVFGGNGQVGQELLRALAPLGAVVATTRSGTLPDGSACETADFSQPDSLPALLDRLQ
PSVVVNAAAYTAVDRAEQDVEAAFAANAQAPGVIARWCAAHGVPFVHYSTDYVFDGQGSA
PYREDEPTAPLGVYGTSKRDGEDAVRAAGGRHLIFRTAWVYASHGANFLRTMLRVGAERE
QLRVVADQIGTPTPAALIADVTAQALQHPGQLSGTWHLTASGQTSWHGFAEAIFAEALAT
GALAKVPTVEAIPSSEYPTPAKRPAWSVLDNRKLQQDFSIVLPAWQDGLKRVMAEIA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgctggtgttcggcggcaacggccaggtcggccaggagctgctgcgcgcgctg
gccccgctgggggcagtggttgccaccacgcgcagcggcacgctgccggatggcagtgcc
tgcgaaaccgccgacttcagccagcctgacagcctgccagccctgctggatcgtctgcag
ccgtcggtggtggtcaatgcggccgcttacaccgccgtggaccgtgccgagcaggacgtg
gaggccgcgttcgcggccaacgcgcaggcaccgggcgtgatcgcgcgctggtgtgcggcg
cacggcgtgccgttcgtgcattactccaccgattacgtgttcgatggccagggcagcgcg
ccctaccgcgaagacgagccgaccgcaccgctgggcgtgtatggcaccagcaagcgcgac
ggtgaagacgcggtgcgtgcggccggcggtcgccatctgatcttccgcacggcgtgggtc
tacgcctcgcacggcgccaacttcctgcgcaccatgctgcgggtgggcgcggagcgcgag
cagctgcgcgtggtggccgaccagatcggtacaccgacgccggccgcgttgatcgccgat
gtcaccgcgcaggcgctgcagcatccgggccagttgtctggtacctggcacctgacggcc
agtggccagaccagctggcatggctttgccgaggcgatcttcgccgaggcgttggccacc
ggcgcgttggccaaggtgccgacggtcgaggcgattcccagttccgagtatccgaccccg
gccaagcgcccggcctggtcggtgctggacaatcgcaagctgcagcaggatttcagcatc
gtgctgccggcctggcaggacggcctgaagcgggtgatggcggagattgcctga
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