Stenotrophomonas sp. 169: ICJ04_06435
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Entry
ICJ04_06435 CDS
T08645
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
steq03009
]
ICJ04_06435 (rimO)
Enzymes [BR:
steq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ICJ04_06435 (rimO)
Ribosome biogenesis [BR:
steq03009
]
Prokaryotic type
ribosomal protein modification factors
ICJ04_06435 (rimO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QNR98530
UniProt:
A0A7H1AQ58
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All DBs
Position
1502575..1503948
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AA seq
457 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPTYDAADVVVVNTCGFIDSAVAE
SLDAIGEAMNANGKVIVTGCLGKRPEQIRAAYPDVLAVSGPQDYQSVMEAVHAAIPPRHN
PFVDLVPDYGIKLTPRHYAYLKISEGCNHHCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAERMWRDKAYQTRMKSLCEGLSELDAWVRMHYVYPYPH
VDDMVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETEAEFEELLSFLDEAQLDRVGAFAYSPVEGATANNLPDPVPEEVKQERLARF
MEKQAQISASRLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADEVTLRVG
DFVDVEITESDEHDLYGDALPPAAVPAARKSLDLKML
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggccctcgtc
gattccgaacgcatcctcacccagttgcgggtggaggggtacgacatcgtgccgacctac
gacgccgccgacgtagtggtggtcaatacctgtggcttcatcgattcggcagtggccgag
tcgctcgacgccatcggtgaggccatgaatgccaacggcaaggtgatcgtcaccggctgc
ctgggcaagcgccccgaacagatccgcgcggcgtatccggacgtgctggccgtgtccggt
ccgcaggactaccagagcgtgatggaagcggtgcatgcggcgattccgccacgccacaac
cccttcgtggacctggtgccggattacggcatcaaattgacgccgcgccactacgcctat
ctgaagatctccgagggctgcaaccaccattgcagtttctgcatcattccgtcgatgcgc
ggcaagctggtctcgcggccggtggatgaggtgctgcgcgaggccgagcggctggtgcgg
ggtggcgtgcgcgaactgctggtggtctcgcaggacacctcggcctacggcgtggatgtg
aagtacgccgagcggatgtggcgtgacaaggcttaccagacgcgcatgaagtcgctctgc
gaaggcttgtccgaactcgatgcctgggtgcggatgcactatgtctacccgtatccgcac
gtggacgacatggtgccgctgatggcggaaaaccgcatcctgccctacctggatatcccg
ttccagcacgccagtccgcgcatcctgcgcctgatgaagcgcccgggtgccgtggaaaag
accctcgaacgcgtgcagaactggcgccgcatcgcgccggacatcaccgtgcggtcgacc
ttcatcgtgggcttccccggtgagaccgaggcggagttcgaagaactgctgtccttcctg
gacgaggcgcagctggaccgtgtcggtgcgttcgcgtactcgccggtggaaggcgcgacc
gccaacaacctgcctgatccagtgccggaagaggtgaagcaggagcgtctggcgcgtttc
atggagaagcaggcacagatttccgcgtcgcggctggaggccaagatcggcactgtgcag
caatgcctggtagacgccattgaaggcgacatcgcggtggcccgctccaaggccgatgca
ccggagatcgatggactggtgcatatccagaacgccgacgaggtgaccctgcgggtgggc
gatttcgtcgacgtggagatcaccgaaagcgatgagcatgatctgtacggcgacgcgctg
ccgccggcggccgtgcctgccgcacgcaagtcgctcgacctgaagatgctgtga
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