Stenotrophomonas sp. ASS1: MG068_14805
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Entry
MG068_14805 CDS
T06051
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_14805
Enzymes [BR:
stes01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MG068_14805
Ribosome biogenesis [BR:
stes03009
]
Prokaryotic type
ribosomal protein modification factors
MG068_14805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
PrmA
Motif
Other DBs
NCBI-ProteinID:
QBL41720
LinkDB
All DBs
Position
complement(3163504..3164865)
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AA seq
453 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYQSVMEAVHEALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHKCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAEKMWRDKAYQTRLKALCEGLSELDAWVRMHYVYPYPH
VDEVVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETEAEFEELLSFLDEAQLDRVGAFAYSPVEGATANDLPDAVPEEVKQERLARF
MEKQAQISAARLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADQVPLRVG
EFVDVDITESDEHDLYGDALPAATRPAFDLKML
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcccttgtc
gattccgaacgcatccttacccagctccgctcggaaggctacgacatcgtgccgtcctac
gattcggccgacgtggtggtggtcaacacctgcggcttcatcgattcggcggtgaccgag
tcgctggacgcgatcggcgaggcgatgaaccagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgaccggagcagatccgcgaggcgtaccccaacgtgctggcggtgtccggc
ccgcaggactaccagagcgtgatggaagcggtgcacgaagcgctgccgcccaagcacgat
ccgttcgtggacctggtgcccgactacggcatcaagctgaccccgcgtcactatgcctac
ctgaagatttccgagggctgcaaccacaagtgcagcttctgcatcattccgtcgatgcgc
ggcaagctggtctcgcgcccggtggatgaagtgctgcgtgaagccgagcgcctggtgcgt
ggtggcgtgcgcgagctgctggtggtttcgcaggacacctcggcctatggcgtggacgtg
aagtacgccgagaagatgtggcgtgacaaggcctaccagacccgtctgaaggcgctgtgc
gaaggcctgtccgagctggatgcgtgggtgcgcatgcactacgtctacccgtacccgcac
gtggacgaggtggtgccgctgatggccgaaaaccgcatcctgccgtacctggacatcccg
ttccagcatgccagcccgcgcatcctgcgcctgatgaagcgccccggcgcggtcgagaag
accctggagcgcgtgcagaactggcgccgcatcgcgccggacatcaccgtgcgttccacc
ttcatcgtcggcttccccggcgagaccgaggccgaatttgaagagctgctgtcgttcctc
gacgaagcgcagctggaccgcgtcggcgcgttcgcctattcgccggtcgaaggtgccacc
gccaatgacctgcccgatgcggttccggaggaagtgaagcaggagcgcctggcccgtttc
atggaaaagcaggcgcagatttccgctgcgcgcctggaggccaagatcggcaccgtgcag
cagtgcctggtcgacgccatcgaaggcgatatcgcggtggcccgttccaaggccgatgcc
ccggagatcgatggcctggtgcacatccagaatgccgaccaggtgccgttgcgcgtaggt
gagttcgtcgacgtggacatcaccgagagcgacgagcacgacctgtacggtgacgcgctg
ccggccgccacccgcccggcattcgatctcaagatgctgtga
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