Symbiobacterium thermophilum: STH1844
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Entry
STH1844 CDS
T00196
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth00900
Terpenoid backbone biosynthesis
sth01100
Metabolic pathways
sth01110
Biosynthesis of secondary metabolites
Module
sth_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
STH1844
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sth01006
]
STH1844
Enzymes [BR:
sth01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
STH1844
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
STH1844
2.5.1.29 geranylgeranyl diphosphate synthase
STH1844
Prenyltransferases [BR:
sth01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
STH1844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAD40829
UniProt:
Q67NB4
LinkDB
All DBs
Position
complement(1990002..1990895)
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AA seq
297 aa
AA seq
DB search
MRGEFQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELF
GLEAADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLT
QAFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIH
SLKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGV
GRDARLDKSTYVTLHGVEGARERAYQAVRLALEELEPFGGAGWVLRALAESVVDRVA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgaggggcgagtttcagcagtacatggccgcgcggcggcagcaggtggaggcggcgctg
gaccggtacaccgccgggctcgacgcgccttcccggctggtggaggccatgcggtacagc
ctccttgccggaggcaagcggctccggccgatcctgaccattgccgcgtccgagctcttc
ggtctggaggcggccgacgtgatgcccggcgcctgcgccctggagatgattcacacctac
tcgctcatccacgacgacctgccctgcatggacgacgacgacctgcgccggggccgtccc
acctgccacaaggtctacggcgaggccatggctgtgctcgcgggggacgcgctgctcacc
caggccttcgcgctgatggccgagcaggcagccgtcccgcgcgtcgggccggcgcgcgcg
gtgcgggctgccgcggagctcgcccacgccgcgggagccgagggcatggtcggcgggcag
gtggaggacttggcgtgggagggccgccaggcggacgaaccgcagctcaggcggatccac
tccctgaagaccggcgcgctgttccgcgccgccgtgcgtatgggcggcatcctcgccggt
gcaggcgaggaggacctggaccggctggggcgctacgcgacgcacttcgggcttgccttc
cagatctgggacgacgtgctggacgtgaccggcgacgccgccctgacggggaagggcgtc
ggccgcgacgcccggctggacaagtccacctacgtcaccctgcacggcgtggaaggcgcg
cgcgagcgcgcctaccaggccgtccgactggcgctggaggagctggagcccttcggcgga
gcgggctgggtgctcagggccttggcagaatctgtggttgaccgcgtcgcctga
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