Sphingobacterium thalpophilum: NCTC11429_00588
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Entry
NCTC11429_00588 CDS
T06778
Symbol
alr
Name
(GenBank) Alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00300
Lysine biosynthesis
stha00470
D-Amino acid metabolism
stha00550
Peptidoglycan biosynthesis
stha01100
Metabolic pathways
stha01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC11429_00588 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC11429_00588 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC11429_00588 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC11429_00588 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stha01011
]
NCTC11429_00588 (alr)
Enzymes [BR:
stha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NCTC11429_00588 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NCTC11429_00588 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
stha01011
]
Precursor biosynthesis
Amino acid ligase
NCTC11429_00588 (alr)
Racemase
NCTC11429_00588 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Kdo_hydroxy
Motif
Other DBs
NCBI-ProteinID:
VTR30173
UniProt:
A0A4U9UC12
LinkDB
All DBs
Position
1:complement(640663..643104)
Genome browser
AA seq
813 aa
AA seq
DB search
MYKISEVVQVLHPNRAFIIDPSSLVQHIFYDSRKIVQADLGVFFALQKNRDGHGYVREAY
DKGVRSFVLQTDEEQEKLFPDANFIWVDDSLDALQALAAFHRQQFSYPVIGITGSNGKTI
VKEWLYQLMSPEYRIYRSPKSYNSQLGVALSLWGLSEQYTLAIIEAGISERGEMARLEDM
IKPTVGLLTNIGVAHKAGFSSKEEKIAEKLLLFKDAETMIFPNSYVENIQLPYRPRKFSW
GYDEGLSLEVYSVKQLNQRSTMVTLYHGGKTFAVEVPFVDKANVENAISCIALMLRFGYE
TGVIASRIKELQPVAMRLELKKGKRNSSIIDDSYSNDLDALQIALEFLNQQRQHARKILI
LSDLPGVSLADAKSLAKLKRLLGEYRLDKLILIGEVLPQLADQFDVPSISYRGTVEFLAD
FRSLQFENSTILLKGGREFHFEQISRLLVAKSHDTVLEINLNAMENNLNSYRQLLPKNVK
LMTMVKAFSYGSGSFEIANLLQFNGVDYLTVAFADEGVDLRGAGITLPIVVMSPDENTFE
SIVQHQLEPEIYSFRILNTFLSFLKDRGITTYPVHIKVDTGMHRLGFMPEEVDELVAILK
RDSILEIRSAFSHLASAGNEKDNAFTQQQIDLLEQFTAQLKAGIGYPFLRHIAATSGIER
WPQAYFDMVRLGIGLYGIGAERQDLPLREVSTLKTNVTQIKHLPAGETVGYNRHGVLKRD
SNIATIKIGYADGYDRRFGNGVGKMMVNGYLVPTIGDICMDMCMLDVTDADIAEEDEVIV
YPDIKLAAESIGTIPYELLTSISQRVKRVYFYE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaatatcggaagtcgtccaagttttacatcctaatcgcgcatttattatcgat
cccagttctttagtccagcacatattttacgatagccgcaagattgtacaggccgatctc
ggtgtgttttttgcactgcaaaaaaatagggatggacacggttatgtacgggaagcttat
gataagggggtaagaagctttgtattgcagactgatgaagagcaggaaaagctttttccg
gatgctaacttcatctgggtggatgatagtcttgatgccctgcaagcactggcggctttc
catcggcagcagtttagttatcccgtgatcggcattactggaagtaacggtaagacgatt
gtcaaagaatggttataccaactgatgtcacccgaatacaggatctaccgtagtccgaaa
agttacaattcgcagctgggcgtagcgctttcgctgtggggtctttcggaacagtatacg
ctcgcgatcatcgaggcaggaatatcagaacggggagagatggcgcggttggaagatatg
attaaaccgaccgttggcctgttgaccaatatcggtgttgcccataaagcagggttttcc
tccaaggaagaaaagatcgcagaaaagctcctcctctttaaggacgcggagaccatgatc
tttcccaatagctacgtcgagaacattcagttaccttatcggccacgaaaattttcatgg
ggatatgatgagggcctgtcattagaagtctattccgtcaagcagctcaatcagaggagt
accatggtcacattatatcatggtggaaagacatttgcggtggaagtgccgtttgtcgat
aaagcgaatgttgaaaatgcgatcagctgcattgctctgatgttgcgttttggttatgaa
acgggagtgatcgcttccagaattaaggaactgcagcccgtcgccatgcggcttgaactt
aaaaaaggaaaaaggaacagctcgataatcgacgattcatatagtaatgatctggatgcg
ctgcagattgcgttggagtttttgaaccaacagcggcagcacgcccgtaaaatattaatt
ctgtctgacttgccgggagtaagtttagcagacgcaaaaagcctggcgaagctcaagcga
ctcttgggggaatatcggctggataagctgatactgattggagaagtattacctcagctg
gcagatcagtttgatgtgccgtcgatatcttatcgcggaaccgttgaatttttagcggat
tttaggtcgttacagtttgaaaactcaactatcctattgaaaggtggaagggagtttcat
ttcgaacagatcagcaggctgctggttgctaagtcgcacgatacagtccttgagatcaac
ttgaatgcgatggaaaataatctgaacagctaccgtcagttattgcccaaaaacgtcaag
ctgatgactatggtaaaggctttttcctatggtagtggaagttttgaaattgccaatctt
ttgcagttcaacggagtcgattacctcactgtggcttttgcagatgagggggtagatctg
cggggagcgggtatcacccttcctattgtggttatgagtcctgatgaaaatacatttgaa
tctattgtacagcatcaacttgaacctgaaatctatagttttagaattctaaacactttt
ttgagttttttaaaggatagagggattacgacatatcccgttcacatcaaagtcgatacg
ggaatgcatcgccttggctttatgcctgaggaagtagacgagcttgtcgccatactaaaa
agagattcgatactcgagatcagatctgcattttcacatttagcgtctgcggggaatgaa
aaggataatgcatttacacagcaacaaatcgatcttttggaacaatttactgcccagctc
aaagcagggatcgggtatccttttctcagacatattgctgccacatccggaatagagcgc
tggccgcaggcctattttgatatggtacgtctagggatcggactgtatggcataggggcc
gaacgtcaggacctgccgttgcgtgaggtcagcacgctaaaaacaaacgtgacgcaaata
aaacacttgcccgcaggggaaacagtgggctacaaccggcacggtgtgctgaagcgagat
agcaatatagccacgatcaaaattggctacgcagatggctatgaccggcgttttggcaac
ggtgtaggtaagatgatggtcaacggatatctggtaccgactattggtgatatttgtatg
gatatgtgtatgctggatgtgacggatgccgacatcgctgaggaagatgaagtgattgtc
tatccggatattaaactcgcggccgaatctatcggaaccatcccgtatgaacttttgaca
agtatttcgcagcgggtaaaaagagtatatttttatgaataa
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