Sphingobacterium thalpophilum: NCTC11429_04480
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Entry
NCTC11429_04480 CDS
T06778
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stha03009
]
NCTC11429_04480 (rsmD)
Enzymes [BR:
stha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NCTC11429_04480 (rsmD)
Ribosome biogenesis [BR:
stha03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC11429_04480 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
BpsA_C
MethyltransfD12
TehB
UPF0020
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
VTR52014
UniProt:
A0A4U9W1T6
LinkDB
All DBs
Position
1:complement(5101223..5101762)
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AA seq
179 aa
AA seq
DB search
MRIIGGRLGGLRLNPPANLPVRPTTDIAKEALFNILHNRLEFEGLGCLDLFAGTGNISFE
LASRGAKAIDAVDLHIRCVQYIAETAKKMEVQQINAKKADVFKFISSCKSSYDLIFADPP
YDIPKLPKLPALIFERQLLNAGGLLIVEHPSTRQMEAHPNFLETRKYGYSSFSFYVNPL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataataggaggtcgtctgggtggtctgcgcttaaatccacccgccaatctgcct
gtaaggccaactaccgatatcgccaaggaagcgttattcaatatattgcacaaccgattg
gaatttgaaggtctaggctgtcttgacctgtttgcaggtacaggtaatatcagttttgaa
cttgcttcacggggcgctaaagcgatagatgccgttgatctccatattagatgcgtgcag
tatattgctgagacggccaagaagatggaggttcagcaaatcaatgcaaaaaaagcagat
gtatttaagtttatttcaagctgcaaaagcagctatgacctaatttttgcggacccgcca
tatgatattccaaaacttccgaaactgccagccctaatttttgaacgacaattgctaaac
gcgggcggcctgctgattgttgagcatccgtcaacgcggcagatggaagcacatcccaat
tttctggaaactcgtaaatacgggtactcgtctttttccttttacgttaatccattgtaa
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