KEGG   Caldimonas thermodepolymerans: IS481_12775
Entry
IS481_12775       CDS       T06911                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm00740  Riboflavin metabolism
sthm01100  Metabolic pathways
sthm01110  Biosynthesis of secondary metabolites
sthm01240  Biosynthesis of cofactors
sthm02024  Quorum sensing
Module
sthm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    IS481_12775 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IS481_12775 (ribD)
Enzymes [BR:sthm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     IS481_12775 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     IS481_12775 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD XOO_2897-deam
Other DBs
NCBI-ProteinID: QPC30630
LinkDB
Position
2711071..2712183
AA seq 370 aa
MSRSDDDRHWMAQALEQARQARIICPPNPAVGCVLVLPDGSSVAAHTQATGSAHAEVAAL
QALAASGRSAHGATAYVTLEPCSHFGRTPPCADALVRAGVRRVVVAVRDPNPLVAGRGIE
RLRAAGIQVDEGLMADEAREVNLGFFSRMLRQRPWVRMKVAASLDGRTALDNGVSQWITS
PAARADGHAWRARAGAVLTGIGTVLEDDPRLDVREVQTPRQPLRVIVDSRLQTPPTARIL
PPPGQVLVYAARPDEAAAQALRAAGAEVQYLPNPHGKVDLPAMLADLAARGINELHVEAG
HKLNGSFVREGLVDEFLVYLAPRLIGPGRGMLELAPLAALDRSVALEFVDVQRVGPDLRV
IARPPGRDRF
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagccgatccgacgacgaccgccactggatggcgcaggccctggagcaggcccgccag
gccaggatcatctgtccgcccaatcccgccgtgggctgcgtgctggtgctgcccgacggg
tccagcgtggccgcccatacccaggcgaccggatccgcccatgcggaagtcgcggccctg
caggccctggcagccagcgggcgatcagcgcacggcgccacggcctacgtgaccctggaa
ccctgctcccacttcggccgcaccccgccctgcgcggacgcgctcgtccgcgccggggtg
cgccgcgtcgtggtggcggtgcgcgatccgaacccgctggtcgccggccgcgggatcgag
cgcctgcgcgcggccggcatccaggtggacgaggggctgatggccgacgaggcgcgcgag
gtcaacctcgggttcttctcgcgcatgctgcgccagcgaccgtgggtgcgcatgaaggtg
gccgcctcgctggacggccgcaccgcgctggacaacggcgtcagccagtggatcacctcg
cccgcggcgcgggccgacggccatgcctggcgggcccgggcgggcgcggtgctgaccggc
atcggcacggtgctggaggacgatccgcggctggacgtgcgcgaggtgcaaacgccccgg
cagccgctgcgggtgatcgtcgactcgcgcctgcagacgccgcctacggcgcgcatcctg
ccgccgccgggccaggtcctggtctacgcggcccgccccgacgaggccgccgcgcaggcc
ctgcgtgcggccggcgccgaggtgcagtacctgcccaacccgcacggcaaggtcgacctg
ccggccatgctggcggacctggcggcgcgcggcatcaacgagctgcacgtcgaggccggg
cacaagctcaacggctcgttcgtgcgcgagggactggtcgacgagttcctggtctacctg
gcgcccaggctgatcggcccgggacgcggcatgctggagctcgccccgctcgccgcgctg
gaccggtccgtcgcgctggaattcgtcgacgtgcagcgcgtcggccccgacctgcgcgtc
atcgcccgcccgccgggacgggaccgcttctga

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