Streptococcus salivarius JIM8777: SALIVA_0153
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Entry
SALIVA_0153 CDS
T02089
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta chain
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
stj
Streptococcus salivarius JIM8777
Pathway
stj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SALIVA_0153 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stj03021
]
SALIVA_0153 (rpoE)
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_0153 (rpoE)
Transcription machinery [BR:
stj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SALIVA_0153 (rpoE)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SALIVA_0153 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CCB94504
LinkDB
All DBs
Position
139138..139713
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AA seq
191 aa
AA seq
DB search
MELDVFAGQEKSELSMIEVARAILETRGRDNEMYFNDLVNEIQNYLEKSDADIRNALPFF
YSDLNTDGSFIPLGDNKWGLRSWYAIDEIDEEVITLEDTDENAPKRKNKKVNAFMDGDED
AIDYNDDDPEDENFTPDSDSLEYDDDSEDDEKAEVESYDSELNEIIPDDDLDDVELSEED
DDDDYEDESND
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggaactagacgtatttgctggacaagaaaaaagtgaattatcaatgattgaagtggcc
cgtgctatcttagaaacacgtggtcgtgataatgaaatgtatttcaatgatttggtcaat
gaaattcaaaattacttagaaaaatcggatgctgatatccgcaatgctttgccattcttt
tattcagatttgaatacggatggaagtttcattccactaggtgataacaaatggggcttg
cgttcatggtatgcaattgatgaaatcgatgaagaagtcatcacattggaagatactgat
gaaaatgcaccaaaacgtaagaacaagaaagttaatgccttcatggatggtgatgaagat
gccatcgattataatgacgatgatccagaagacgaaaacttcacacctgattctgatagt
cttgaatatgatgacgatagcgaagatgatgagaaagccgaagtggaatcttatgactct
gagttgaatgaaattattccagatgatgatttggatgatgttgagttgtcagaagaagat
gatgacgatgactatgaggatgagtcaaacgactaa
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