Sphaerodactylus townsendi (Townsend's least gecko): 125427323
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Entry
125427323 CDS
T08213
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125427323 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125427323 (CLP1)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
125427323 (CLP1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
125427323 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
AAA_22
TniB
AAA_16
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
125427323
NCBI-ProteinID:
XP_048342537
LinkDB
All DBs
Position
LG02:70957591..70966237
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AA seq
425 aa
AA seq
DB search
MAEEAGDEKKLVAKFELERETELRFEVEASQTVQLELLTGMAEIFGTELTRNKKFPFDAG
AKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDER
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagcaggggatgaaaagaaactggtggccaaatttgagctggagagggaa
acagagctccgctttgaggttgaagcctcacaaactgtccaactggagcttctgacaggc
atggctgagatctttggaactgaactgactcgcaataagaaattcccctttgatgctggt
gctaaagtggctgtcttcacttggcacggctgttcggtacaactgactggccgaactgaa
gtggcctatgtgtccaaagacacccccatgctgctgtacctcaacacccatacagccttg
gagcagatgcggtggcaagctgaacgtgaagatgaacggggtcctcgtgtcatggtggtg
ggccccacggatgttggcaagtcaactgtttgccgcctgctactgaattatgctgtgcgc
ttagggcgccgacccacttttgtagagctagatgtaggccaaggctcaatctctatccca
ggcactatgggggctctctacattgaacgacctgcagatgtcgaagaaggcttctcagtt
caggctccccttgtgtatcactttgggtccactacacctggtactaacatcaagctctat
aataagatcacatcccgtttggctgatgtcttcaaccagcgctgtgaggttaaccgtcga
gcttcagtcagtggctgtgtcatcaatacttgtgggtgggtgaagggatctgggtaccag
gcacttgtacatgctgcttcagcatttgaagttgatgttgtagtagtgctggaccaggaa
cgcctttacaatgaattgaagcgggatctgccccactttgttcgaacagtgctgctccct
aagtcaggtggagtagtggagcggtccaaggacttccgacgggaattccgtgatgaacgc
atacgtgaatacttttacggtttccgagggtgtttctacccacatgcctttgatgtcaag
ttctcagatgtcaagatatacaaggtgggagcccccaccatccctgactcatgtctgccc
ctgggcatgtcacaagaagataaccagctcaagttggtaccagttacacctggacgtgat
atggtacaccatctgttaagtgttagtactgctgatggcactgatgagaacatctctgag
actagtgtggctggtttcattgtagtcactggagtggatctggagcgacaggtcttcaca
gtgctctcaccagcgcctcgtcctttgcccaagaacttcctgcttatcatggacattcgt
ttcatggatctcaagtag
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