Sphaerodactylus townsendi (Townsend's least gecko): 125430986
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Entry
125430986 CDS
T08213
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04020
Calcium signaling pathway
stow04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125430986 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125430986 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125430986 (GRIN2A)
Ion channels [BR:
stow04040
]
Ligand-gated channels
Glutamate (ionotropic)
125430986 (GRIN2A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
125430986
NCBI-ProteinID:
XP_048349392
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Position
LG04:140245211..140544693
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AA seq
1465 aa
AA seq
DB search
MELGKMAQVCWTLLVLRILLAESAFLHGPERSYPILNIAVILGRTQHLTERDLRGLWTGE
MAANFTLEVNVVPLLVNQTDPKSIITNVCDLMSGTKVHGVVFGDDTDQEAVAQILDFISS
QAFIPILGIHGGSSMIMAEKDAMSTFFQFGASIEQEAIIMLKFMQYYDWHVFSLVTSTFP
GYRDFISFVKYTVENSFVGWDMQNIITLDAPIGDARTTVQLKKIHSSVIMLYCSKDEAVY
VLEEARSLGLTGYDFFWIVPSMVSGNMEITPQAFPAGLISVAYDEWDYSLKARVQDGLGI
ITMAAAAMLDRYSFIPEARTSCYSQQERNEQPSHTLHNFMMNVTWEAKDLSFTDDGYQAH
PRLVVIVLNQTREWEKVGKWENKTLTHKYSVWPRFNSFNDSDPDNNHLSIVTLEEAPFVI
VEDMDPLTETCVKNTVPCRKFVVINNITKEGRNVKKCCKGFCIDILKKLSKAIKFTYDLY
LVTNGKHGKKINNEWNGMIGEVVKKQAVMAVGSLTINGERSEVVDFSVPFVETGISVMVS
RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAQGRDPHGPS
FTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEF
VDQVTGLSDKKFQQPYAYSPPFRFGTVPNGSTERNIRNNYKEMHAYMVKYNQKGVEDALV
SLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRPIDLA
LLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWE
HLFYWKLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFTLTSSQTNMLKLL
RTAKNMTNLADMNPSRLNSPKRTPDFIHRGSLIMDMMMDKGNLIFSDNRTFPGKEKVFSD
NISELHTFPGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVATEAKANSRPRQLWRKSV
ESLRQESLRQDSIRQGCPRENGSEENRQHSLKSQRYIPEEIIRSDVSDTSSRATCHMEPE
NNKHHKSKDNAKKRPVSKYPKDCSEVELTYLKNKQSLPRDKIYIIDADKERSFHLDTPQY
IENIILPETMEYSEVYQDHNDNYRNAEPSNRTPLPNEESLPNNDQYKLYSKHYSGKEKNA
SFGEANERYRQNATHCRSCLSSLPTYAGHYSSRSPYKCDACMRMGNLYDIDEDQMLQETA
NTTPRENLYRHDWVQNNNTQPPKKSKLKMSRQHSYDNILDKCREMDIGRPARSTSLKEKE
KLLEVNPYATLFTVPQSKLLSNKAPLFSRTLDDGKRVKSLYSDRSAENPFLHSYCDDQHL
VLGRSPTDSYKQSLKSRYDSYSRSSLRSTASYCSRDGRVHNDVYISEHGLPYIANKNSVY
STPRVLNSCSNRRVYKKMPSIESDV
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggaactggggaagatggcgcaagtgtgctggacgctcctggtgctccgcatccttctg
gccgagtccgctttcctccacgggcccgagaggagctaccccatcctcaacatcgctgtc
attctgggaaggacgcagcacctgacggaacgggacctccgcggcctctggacgggggag
atggcggccaacttcacccttgaggtcaacgtcgtccccctcctggtcaaccagaccgat
cccaaaagcatcatcaccaacgtgtgcgacctcatgtcgggcaccaaggtccacggggtg
gtttttggagacgataccgaccaggaggccgtggcgcagattttggattttatttcatcg
caggccttcatcccgatcttggggattcacggcggctcttctatgatcatggcggaaaag
gatgccatgtccacgtttttccagtttggggcttcaatcgagcaagaagccatcatcatg
ttgaaattcatgcaatattacgactggcatgtcttctcgctggtgaccagcacctttccc
ggctaccgggacttcattagcttcgtcaagtacactgtggagaacagttttgtgggctgg
gacatgcagaatattatcaccttagatgcgccgattggtgatgccaggacaacggtgcaa
ctgaagaagatccactcctcggtcatcatgctgtactgttcgaaagacgaagccgtctat
gtcctggaagaagctcgctcgctgggcttaaccgggtacgacttcttctggattgtccct
agcatggtcagtgggaacatggagatcacacctcaagcgtttcccgccgggttgatttct
gtggcctatgacgaatgggactacagtttgaaggctcgagtccaggatggccttgggatt
attaccatggcagcagctgccatgttggacaggtactccttcatccccgaagcgagaacc
agctgctacagccagcaagagaggaatgagcaaccatctcacaccctacacaactttatg
atgaatgtgacctgggaagcgaaggacttatccttcaccgacgacggctaccaagcgcac
cccagactggtggtcattgtgctgaaccagacgcgggagtgggagaaggttgggaaatgg
gagaacaagacgctgacccacaagtattctgtctggccccggttcaattccttcaacgac
agcgacccggacaacaaccacctcagcatcgtcaccttggaagaagctccgtttgtcatt
gtggaagatatggatcctttgacggagacttgcgtgaagaacaccgtgccatgccggaag
tttgtcgtcataaacaacatcaccaaagaagggaggaacgtgaagaagtgctgcaaggga
ttctgtattgacatcctgaaaaagctgtccaaggccatcaaattcacctatgacctctac
ctggtgacgaatgggaagcacgggaaaaagatcaataacgagtggaacggaatgattggg
gaagtggtcaaaaagcaggctgtgatggctgtcgggtccctcacgattaacggggagcgt
tcggaggtggttgacttctctgtgccgtttgtggagacggggatcagcgtcatggtgtcg
cggagcaacggcacagtgtctccatctgcctttttggaacccttcagcgcttccgtctgg
gtgatgatgttcgtcatgctgctgatcgtgtctgccatcgcggtcttcgtgtttgagtac
ttcagccctgtgggctacaaccggaacttggcgcaagggagagatccccacggaccatcc
ttcacgatcggcaaagccgtctggctgctctgggggctggtgttcaacaactccgtgccg
gttcagaacccgaaagggacgaccagcaagatcatggtgtcggtttgggccttcttcgcc
gtcatcttcctggccagctacacagccaacctggctgccttcatgatccaagaggaattt
gtcgaccaggtgactggcctgagtgacaagaagtttcaacagccgtacgcttattcaccc
ccttttcgcttcgggacggtaccgaacgggagcaccgagagaaacatccggaataactac
aaggagatgcatgcgtacatggtgaagtacaaccagaaaggagtggaagatgctttggtc
agcttgaaaactgggaagctggatgctttcatctacgacgcggcagtgctgaactacaag
gccgggcgggacgaggggtgcaaactggtgaccatcggcagtgggtacatcttcgccacc
actggctatggcattgccctccagaaagggtctccgtggaagaggcccatcgacctggcc
ctcttgcagttcgttggagatggggagatggaggagctggagaccctatggctcaccggc
atttgccacaacgagaagaacgaggtcatgagcagccagctggacattgacaacatggcg
ggcgtcttctacatgcttgcagctgccatggcgctcagcctgatcacattcgtgtgggag
cacttgttttactggaagctgcggttctgcttcaccggggtctgctccgatcggccagga
ctgctgttttccatcagcaggggcatttacagctgcattcatggagtgcacatcgaggaa
aaaaagaaatcgcccgacttcactttaacgagctcccagacgaatatgttaaaactcctg
cgaacggccaagaacatgactaatttggctgacatgaacccctccaggctcaattcccct
aaaaggacccctgatttcattcacaggggatctttaattatggacatgatgatggacaag
gggaatctgatcttctcagacaatagaaccttcccagggaaggagaaagttttcagtgat
aatataagcgagttgcacacctttcccggcaaccgccacaaagataacctcaacaattac
gttttccaagggcagcaccctctcacactgaacgaatcaaatcccaacactgtggaagtg
gctgtcgcaactgaagccaaagcgaactcgcgtccgaggcagttgtggaggaagtcagtc
gagtctctgcggcaagaatctctccgccaagattcgattcggcaaggctgcccgagggag
aatggttctgaggaaaaccgacagcattccttgaaaagtcagagatacatccctgaggag
atcatccgctcggatgtttcagacacctcgagccgagccacttgccacatggaacctgaa
aacaacaagcaccacaagtccaaggacaatgcgaagaaaagacccgtctcaaaatatccg
aaggattgtagtgaagtagagttgacatatctgaaaaacaaacaatctttgcctcgggat
aaaatttacattatagatgcggataaggaacgaagttttcatttggatacccctcagtat
attgagaatattatccttccagagacgatggagtattctgaagtgtatcaggatcataac
gacaactacagaaatgctgagccgagtaacagaactcctttgccaaacgaagaaagtctt
ccaaataacgatcaatacaagctttattcaaagcactacagcggaaaagaaaagaatgct
tcttttggggaggcgaatgagaggtaccggcagaacgccactcactgcaggagttgtctt
tccagccttcccacttacgccgggcactattccagccggtcgccgtacaagtgtgacgct
tgcatgcggatggggaacttgtatgatatcgacgaggatcagatgttgcaggaaacagcc
aacaccacaccacgggaaaacctgtatcgccacgactgggtccagaataacaacacccag
cctcccaaaaaaagcaaactgaagatgagccggcagcactcatacgacaacatcctagac
aaatgcagggaaatggacattgggaggcccgcccgcagcaccagcctgaaagagaaagag
aagcttctcgaagtcaacccttatgcaaccctctttactgtcccccagagcaaactcttg
agcaacaaggctccgcttttctcccgcaccctggacgatgggaagagggtcaagtccctg
tattctgaccgctcagctgagaacccttttctgcactcttattgcgacgaccagcactta
gttctcgggcggagccccacagactcttataaacaatccttaaaatcgagatacgacagt
tactcaaggtcgtctctaaggtcgaccgcctcgtactgctccagagacggccgggtccac
aacgatgtgtacatttcagagcatgggttgccttacattgccaataagaatagtgtgtac
tcaactccacgagttttaaattcctgcagcaatagacgcgtgtataagaagatgcctagc
attgagtcagatgtttag
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