Sphaerodactylus townsendi (Townsend's least gecko): 125432395
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Entry
125432395 CDS
T08213
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125432395 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stow04090
]
125432395 (VCAM1)
04091 Lectins [BR:
stow04091
]
125432395 (VCAM1)
CD molecules [BR:
stow04090
]
Proteins
125432395 (VCAM1)
Lectins [BR:
stow04091
]
I-type lectins (Siglecs)
125432395 (VCAM1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Izumo-Ig
C2-set
Ig_4
Ig_5
ICAM1_3_5_D2
C2-set_2
Ig_6
Receptor_2B4
ICAM_N
Motif
Other DBs
NCBI-GeneID:
125432395
NCBI-ProteinID:
XP_048351821
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All DBs
Position
LG05:38732933..38746443
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AA seq
519 aa
AA seq
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MARVISAVTALLFFMNSKAFDVEEIVPGGEVAAEIGSKLVLNCNATGCESPAFFWRTQLD
YPLGGNVSNQGSSSVLTIKNVSKGHERDYLCSASCGNNNKQRTVSIRIFSFPSDPIIETS
GPLVLGKPASITCRVLEVYPSDGLDLELKKGEDIMLSTTGFEDSVTTTFIPTETDIGKEI
TCVASLSVEAMEPKQRQTVHKLNVNYGPWKTRIAASPGTTVLEDGTLILHCVSESNPPPR
IVWKKQIANETLQTIAKNHTLSIPNVQFGDSGVYICEVTNEVTNQMENRTVTVSVQGVPR
LPEFSVLPSETVIEGESVTLQCSVESSPVAQFIIIRKLPSQDEILDSKDGIVHIPSVTPD
DAGSYECEVENVFERRKMSITLSVKSPSSTAATFTYQPENITEVEDFDSNSATYNIPQDN
SILENETSLAPKDRTSTLYILSNNDTITYAVEVFAAVTNGTEEIEIIIVKTEEADYVTPM
IIGVSSVATVAGPVAAILVYISRKTKINGSYSLVRSLSP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccagagtgatttccgcagtgacagcgcttttattcttcatgaattctaaagcattt
gatgttgaggagatcgtacctggtggtgaggttgctgcagagataggcagcaagctggta
ctaaactgcaatgcaactggatgtgaatccccagctttcttttggaggacccagttggac
tacccattaggagggaacgtgagcaatcaggggagcagttcagtccttactataaagaat
gttagcaaaggacatgagcgtgattatctctgcagtgcctcatgtgggaacaataataaa
caaaggacagtcagcattcgcattttctcatttcctagtgatcccattattgagactagt
ggaccacttgttcttgggaaaccagctagcatcacctgtagagttctggaagtataccct
tctgatggactggatttggagctgaagaaaggagaggatatcatgcttagtacaacagga
tttgaagattctgtgacaactacctttatacccactgagacagatattgggaaagaaatc
acgtgcgtggctagtctgtcagtggaggcgatggaacccaagcaaaggcaaacggtgcac
aaacttaacgtgaattatggcccatggaaaactcgtattgctgcgtctccaggcaccact
gtgttagaagatggcacactgattcttcattgcgtgtctgaaagtaatcctccaccaagg
attgtatggaagaaacagatagctaatgaaactctgcaaaccattgcaaaaaatcatacc
ttgtcaattccaaatgttcagtttggtgattctggagtctacatctgtgaagtcacaaat
gaagtaaccaaccaaatggaaaacagaacagttactgtatctgtacaaggtgtccccagg
ttgccagaattttctgtccttccttctgaaacagtgattgaaggagaaagtgttacactg
cagtgctctgtggaaagcagccctgttgcccagttcatcatcataagaaaattgcccagt
caagatgagatacttgatagcaaagatggaattgttcatatcccaagtgtgactcctgat
gatgctggaagttatgagtgtgaagtagaaaatgtatttgagagaaggaaaatgtcaata
acactaagtgtgaaatctccttcctcaactgctgcaacatttacctatcaaccagaaaac
attactgaggtggaggattttgatagtaatagtgcaacttataatattccccaagacaat
agcattttggaaaacgaaacttcacttgcaccaaaggacaggacttccacattgtatata
ttatccaacaatgatacaatcacatatgcggtggaagtttttgctgctgtcacaaatggt
acagaagagatagaaattataatagtcaaaacagaagaagcagattatgtgactcccatg
atcatcggggtttcttctgtagcaacagtggcaggccctgtggcagcgatattggtttac
atttccaggaagacaaagattaatggatcctacagtcttgtacgctcgctgagcccataa
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