Sphaerodactylus townsendi (Townsend's least gecko): 125439113
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Entry
125439113 CDS
T08213
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stow03016
]
125439113 (CDKAL1)
Enzymes [BR:
stow01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125439113 (CDKAL1)
Transfer RNA biogenesis [BR:
stow03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125439113 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
125439113
NCBI-ProteinID:
XP_048363977
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Position
LG09:26719120..27073626
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AA seq
577 aa
AA seq
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MPAVCDSLLEDIEDIVSAQDPKPHDRRFRRENIIPKVHKRKSQKNVAADDDPPSDSVIPG
VQKIWIRTWGCSHNSSDGEYMAGQLAAYGYKITENASEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLQGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIQELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHVPVQTASDSILMDMKREYCVADFERVVDFLKEKVPGITIATDI
ICGFPGETDDDFQETMKLVEKYKFPSLFINQFYPRPGTPAAKMHQVPAQIKKQRTKELSS
LFHSYNPYDHKIGERQKVLVTEESFDSKFYVGHNQFYEQVLVPKNPEFMGKMVEVDIYEA
GKHFMRGQPIPDARVFSPSVTRPLVKGEVSGLTEEFRHALENGSESKTCPSSEKQKVPLS
HRVAMRLSWQQGENVLKMLSLSMALLAVLIAFYYGGV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtctgtgattcccttcttgaagacattgaagatattgtgtcagcacaagac
ccaaagcctcatgataggcggttcagaagagaaaatattattcctaaagtacacaaacga
aaatcacaaaagaatgtagcagctgacgatgatccccccagtgacagtgttattcctggg
gtacaaaaaatttggatacgtacatggggctgttctcataatagctcagatggagaatac
atggctggacagttggctgcttatggatacaaaattacagagaacgcttcagaagcagat
ctgtggctactgaacagctgcactgtaaagaatccagcagaagaccacttcagaaactca
attaagaaagcacaagaaggaaaaaagaaagtcgtcctggctggttgtgttccccaagcc
cagcctcgccaagaatacctacaaggcctgagcattattggggtccagcagatagatcgt
gttgtcgaagtcgttgaggagactatcaaaggtcactctgtgagattgctgggtcagaag
aaggataatggaaaacggttggggggagctcgattggatttgcccaagattagaaagaac
ccattgatagaaataatttccatcaatacagggtgcctgaatgcatgtacatattgcaaa
accaaacatgccagaggaaatctagcaagttatcctattcaagagctggtagacagagct
aaacagtcctttcaagaaggggtatgcgagatatggctgaccagcgaagacacgggggct
tatggaagagacattggcacagacctccccactctcttgtggaaactggtcgaagtgatc
cctgagggagcaatgctaagacttggcatgacaaatccgccctatattttggagcatctg
gaggaaatggcaaaaattctcaaccatccaagggtgtatgcttttctccacgtgccagtc
caaaccgcttctgacagtatactcatggacatgaagagggaatactgtgtggcagacttc
gaaagggtagtggatttccttaaagaaaaagtgcctggaataacaattgctacggacatc
atttgtgggtttccaggggaaacagatgatgattttcaagaaaccatgaaacttgtagaa
aagtataagtttccaagtctctttattaaccagttttacccacgccctgggactcctgct
gcaaaaatgcaccaagttccagctcaaataaaaaagcaaagaacgaaagaactatccagt
ttatttcattcatacaacccttatgatcacaagattggagagagacagaaagttctggtt
acagaagaatcgtttgactccaagttttatgttggccataatcaattctatgagcaggtt
ctcgtgccaaaaaacccagagttcatgggtaaaatggtggaagtggacatttatgaagcc
gggaaacactttatgagagggcagcctattccagatgccagagtgttcagtccatctgtt
actagacccttagtcaaaggagaagtttctggcttaacagaggagttcagacatgcactg
gagaacggctcagaatcaaaaacctgtccatcttctgagaagcaaaaagtaccattgagc
cacagggtggcaatgcggttgtcatggcaacaaggggaaaatgtgctgaagatgctgtca
ctaagcatggctcttctggcagttcttattgccttttactatggaggtgtgtaa
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