Sphaerodactylus townsendi (Townsend's least gecko): 125441643
Help
Entry
125441643 CDS
T08213
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04020
Calcium signaling pathway
stow04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125441643 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125441643 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125441643 (GRIN1)
Ion channels [BR:
stow04040
]
Ligand-gated channels
Glutamate (ionotropic)
125441643 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
125441643
NCBI-ProteinID:
XP_048368295
LinkDB
All DBs
Position
LG12:complement(35550813..35606037)
Genome browser
AA seq
963 aa
AA seq
DB search
MSAMRLLLLAVLVSFSFARAGCEPKIVNIGAVLSTKKHEQVFREAINQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRYYKWNHIILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLEQLSYDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVI
ILSASEDDATTVYTSAAKENMTGPGYVWLVGEREISGNALRHAPEGLIGLQLMNGKNESA
HIRDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYAEGVTGRVE
FNEDGDRKYANYSVMNLQNNKLVQVGVYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLK
IVTIHQEPFVYVKPTMTDGKCKPLLNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCID
LLIKLAKTMNFTYEVHLVGDGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQSSLSLVAVGFTFRKGPEH
FYLVDRKSGRAEPDPKKKATFRSFTSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVS
TVV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgcgcctcttgctcctcgctgtcctcgtctccttctcgttcgcccgcgcc
ggctgcgagcccaagatcgtcaacatcggcgcggtgctgagcaccaagaaacatgagcag
gtcttccgcgaggccatcaaccaagccaacaagcgccatggcacctggaagatccaactc
aacgccacctccgtcacgcataagcccaacgccatccagatggcactgtccgtttgcgag
gatctcatctctagccaggtctatgccatcttagtgagccacccaccagctccaaatgac
cacctaacgccaacgcctgtgtcatacacagccggcttttataggattcctgttatcggt
ctgacaacacgcatgtccatatattcagataagagcatccacttgtccttcctgcgcact
gtccccccctattcccaccagtccaatgtctggtttgaaatgatgcgctattataagtgg
aaccacattattctcatagtcagtgatgatcacgaggggcgggctgcgcaaaagaagctg
gagaccctcttggaagagaaagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactatcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaaccc
ggaacaaaaaatgtgacttcgttgctgctggaagctaaggaactggaggccagggttatt
atcctctctgcaagtgaggatgatgctacaactgtgtacacatcagcagccaaagaaaac
atgactggcccaggctatgtgtggctggtaggggaaagggagatctcaggcaatgccctg
cgtcatgcgccagaagggctcattggtttgcagctcatgaatgggaagaatgaatctgct
cacatcagagacgcggtggctgtggtggcccaggctgttcatgacttgtttgagaaagag
aacattacagacccaccaaggggctgcgtgggaaataccaacatctggaagacagggcct
ctgttcaagagagtgttgatgcagaccaaatatgccgaaggtgtgactggccgggtagag
ttcaacgaagacggagaccggaaatatgccaattacagtgtcatgaatttacagaacaat
aaactggtgcaagttggagtctacaatggtagccacttcctgcccaatgaccgcaaaatc
atctggcctggaggagaaacagagacaccacagggctacgaaatgtctacaaaattaaag
attgtcacaatccaccaagagccctttgtctacgttaaaccaaccatgacggatggaaaa
tgcaaaccactgctcaacagtacaggggggctggtgcagcaggtcctctgcactgggcct
aatgagactatgccaggccgccccagtgtgatgctgtgttgctatggcttctgtatcgac
ttattgatcaagcttgctaagacaatgaattttacctatgaagttcaccttgtaggcgat
ggcaaattcgggacacaagagcgggtgaacaacagcaacaagaaggagtggaatgggatg
atgggggagctgctgagtggccaggctgacatgattgtggctccactgactatcaacaac
gagcgagcacaatacattgaattctccaagcctttcaagtaccagggactcaccatcttg
gtcaaaaaggaaattccccgcagcacactggactcattcatgcaaccattccagagcact
ctgtggcttttggtggggctttcagtacatgtggtggcagtgatgttgtatctacttgac
cgcttcagcccgtttggccggtttaaagtgaacagtgaggaagaagaagaggatgccctg
actctctcttctgccatgtggttctcttggggagtcctcctgaactctggcatcggagaa
ggtgctccccggagtttctcagctcgaattcttggaatggtgtgggctggatttgctatg
attattgtagcctcatatactgccaacctggctgccttcctggtgttggacagacctgaa
gaacgaatcacaggcatcaatgaccccaggctgcgaaacccctcagataaattcatatat
gccacagtgaagcaaagttcggtggacatttacttccgccgtcaggtagagctgagcacc
atgtaccgccacatggagaaacacaactacgagagtgctgctgaagccatccaggccgtc
agggataacaagctccacgcgttcatctgggattcggctgtgctagaatttgaagcctcg
cagaagtgtgacctggtgacaacgggggaactgttcttccgctctggctttggcatcggg
atgcgcaaggacagcccttggaagcagaatgtctccctggccattctcaacctccatgag
aacggcttcatggaagagcttgacaagacttgggtgaggtatcaggagtgtgattcccga
agcaatgccccagcaacactcacctttgagaacatggcaggtgtattcatgctggtggct
ggaggtattgtggccgggatatttttaatattcatagaaatagcttacaaaaggcataaa
gacgcccggaggaagcagatgcaactggcgtttgcagccgttaatgtgtggaggaaaaac
ctgcagtcctctctctctcttgtggccgtaggattcaccttcagaaaaggccccgagcat
ttttatttagtggatagaaaaagtggtagagcagaaccagaccctaaaaagaaagccact
tttaggtccttcacctctaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgcagtatcatcccactgacatcactgggcagctcaacctctccgacccctcggtcagc
accgtggtgtga
DBGET
integrated database retrieval system
