Sphaerodactylus townsendi (Townsend's least gecko): 125445932
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Entry
125445932 CDS
T08213
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03440
Homologous recombination
stow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125445932 (BRIP1)
03460 Fanconi anemia pathway
125445932 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125445932 (BRIP1)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125445932 (BRIP1)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125445932 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
125445932 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
125445932
NCBI-ProteinID:
XP_048375329
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All DBs
Position
LG16:complement(5526951..5593018)
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AA seq
764 aa
AA seq
DB search
MASTGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNSKQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKPPSEWSCLKECNKAGTLMLCRCHCHAEPTTQDQSGAGSNQSTCSYFTDDG
TKTPLNNGATQRNGEASKITLSSKLSAKKQATLHDTEDDFKVDRKRVRSVEMEEQAKKRN
RLAQGVQLVDALEVYQQQRNGELTVSSKNPAPSSLKMLAARWARTTAIGGIVPNDDGASD
VVSVRRLGLVYEVVGATAVVFDVIAPHEPHQTAATLVSQIDPLQLNTSHSTRHVYDALQL
LYMNLFSVWGNEFIYNDRNSLRMCCAERARVSAPVIRTVSVSKESQERPNEEILASISSH
QSEVWSSGITGTDPTGGVQFKALVAALVEEDLLVGGGCGRPAGQMEINLRGQVVILDEAH
NIEDCARESASYSVTETQLKSAREELDAMVNGHIRKGDHEPLRAVCCSLTNWLRESSGQL
VERGYENSSKVWSGQQMVTFLDNMGINNASFPILQKHLAVVLEKEEKTTWFNGKEKAFSV
PVISPSAQITLKGLFMVLFYLFKENHRYADDYRVALQQTYVWRNENTADPKDAVDIFARA
KRKARHKTAERTLSFWCLNPAVAFSDVRDNVRSIVLTSGTLSPMDSFSSELGVKFSIQLE
ANHVIRDSQVWVGTIGAGPKGRPLCATFQHAETFDFQDEAGSLLLSVCQTIGQGVLCFLP
SYKCTCPQTVWSSDEGRRNCAWGTNCPRRPPPVLKTPPRHAPDT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaggggctgagtacacgattgggggagtgaaaattctcttcccttgcaag
gcttatccttcacagttggctatgatgaatgcgatcgtcaaggggctgaactccaagcag
cactgtctattggagagcccaacaggaagtgggaaaagcctggcgttgctttgctcagcg
ttgtcgtggcagcagtctctgtatgaaaaaccacccagtgaatggtcatgcttaaaggaa
tgcaacaaggctgggaccctgatgctctgtcgctgtcattgccatgcggaacccacaact
caagaccagagcggtgcagggtcgaaccaaagcacttgctcttacttcactgacgatgga
accaagacgcccctgaataatggagccacacagagaaatggagaggcctccaaaatcaca
ctttcttcaaaactgtctgcaaagaagcaagcaacgttacatgacactgaagacgatttt
aaagtggataggaaacgagttcgctcagtagagatggaggagcaggctaagaaacgaaat
cgactagcccaaggagtgcagttagttgatgctttggaagtgtatcagcagcagagaaat
ggggaattgactgtatcctcaaaaaatccagccccttcctctctcaaaatgttggcagcc
agatgggctaggaccaccgcaataggaggcatagtcccaaacgacgacggcgcttcagat
gtggtctccgtgagacggctgggcttggtttatgaagttgttggggcaactgcggtggtt
ttcgacgtgatcgccccgcacgagccgcatcagacggctgctactttagtatcccagatc
gatccacttcagcttaacacgtctcattccacacggcacgtttatgacgcgctgcagctg
ctatacatgaatttgttttccgtttggggaaacgagttcatttataacgaccgcaactcg
ttacgaatgtgctgtgcggaacgagcccgagtgtccgcgcccgtgatcagaacggtgagc
gtgagcaaggagtcccaggaaaggcccaacgaggagatcttagcctcaattagtagccac
cagtcagaggtctggagttcaggcatcacaggaaccgacccgactggcggagtgcagttc
aaggcgctggttgcagcgttggtcgaggaggacctgttggtcggaggaggttgtgggcgc
cctgcaggacagatggagatcaacttgcgaggccaagtggtcattttagacgaagctcac
aatattgaggattgtgctcgggaatcggccagctacagcgtgacagaaactcagcttaaa
tcggcccgagaagagctggacgccatggtgaatggccacattcggaagggggaccatgag
cctttgcgtgctgtgtgctgcagcctgacaaattggttaagggaatcctctggtcagctt
gtagagagaggttatgaaaattctagtaaagtttggagtggacaacaaatggtgacattc
ttggacaatatggggataaacaatgcttcattccccattttacagaaacatcttgcagtt
gtccttgaaaaggaagaaaaaacaacctggtttaatggaaaagaaaaggcgttttcagtt
ccagttataagtccttcggctcagattacgctgaaagggctgttcatggtcctgttttat
ctttttaaagaaaatcatagatatgcagatgattacagagtcgccttgcagcagacctat
gtttggagaaacgaaaatacggctgatccgaaagatgccgtcgacattttcgcacgagcc
aaacgaaaagcgcggcacaaaacggcagaacggacgctcagcttttggtgcttgaatcct
gctgtggcattctcggatgtgagagacaatgtcagatcaatcgttttaacctctggaact
ctttctccaatggactcgttttcttccgaacttggtgtgaaattttccattcaacttgaa
gcaaaccacgttattcgggattctcaggtgtgggtcggtaccattggagcaggccccaaa
ggcaggcccctgtgtgctactttccagcatgcggaaacctttgatttccaggacgaggcg
gggtctctgctgctgtccgtctgccagacgatcgggcaaggggtgctgtgctttttgcca
tcttacaagtgcacatgcccacaaacagtgtggagcagtgacgaagggaggaggaactgc
gcttggggcacgaactgcccccggcgccctccccccgtcctcaaaacgcccccccgacac
gcccccgacacgtga
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