Salinispora tropica: Strop_1396
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Entry
Strop_1396 CDS
T00504
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stp03009
]
Strop_1396
Enzymes [BR:
stp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Strop_1396
Ribosome biogenesis [BR:
stp03009
]
Prokaryotic type
ribosomal protein modification factors
Strop_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ABP53863
UniProt:
A4X4R3
LinkDB
All DBs
Position
1567138..1568661
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AA seq
507 aa
AA seq
DB search
MVSATPPAPADGRRVALLTLGCARNEVDSEELAARLHSDGWQVTTDGEGADVVVVNTCGF
VEKAKQDSIQTLLAAAETGAKVVAAGCMAERYGRELAESLPEAQAVLSFDDYPDISDRLG
AVLAGTAIDAHTPRDRRELLPLTPVRRGEAAVSLPGHGTPAAVAQPGARSAPIEVDEHTP
AHLRPVLRRRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRPPEALLAEAEWLARTG
VRELVLVSENSSSYGKDLGDPRALEKLLPQLAAVDGIVRVRASYLQPAETRPGLVEAIAT
TPGVAPYFDLSFQHSSEAVLRRMRRFGSTDRFLELLGSIRALSPEAGARSNFIVGFPGET
RADVAELVRFLEEARLDAIGVFDYSDEDGTEAAGLSGKVTTATVKRRYDRLSALADELCA
QRAEQRLGSTVQVLVDSVDGGVVEGRAAHQAPEVDGSTTLVAPVGGGVDLTALRPGDLVE
CTVTATEGVDLVAVPDAMISAAPGVAR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccacccctcccgcacccgccgacggccgccgcgtcgccctgctgaccctg
ggctgcgcccgcaacgaggtcgattccgaggagctggctgcccggctgcactccgacggc
tggcaggtgaccaccgacggtgaaggcgccgacgtggtggtcgtgaacacctgcgggttc
gtcgagaaggccaagcaggattcgatccagacgctactggccgccgccgaaacgggcgcg
aaggtggtggcggcggggtgcatggccgagcggtacgggcgggagctcgcggagagcctg
cccgaggcgcaggcggtgctgagcttcgacgactatccggatatctccgatcgactcggc
gcggtgctcgccggaaccgcgatcgacgcgcacaccccgcgggaccggcgggagctcctt
ccgctcaccccggtacggcgtggggaggcggcggtgtcgttaccgggccacggtaccccg
gcggccgtggcgcagcccggtgcgcggtccgctccgatcgaggtcgacgagcacacgccg
gcgcatcttcgtccggtgctgcgtcgccggctcgacaccggaccggtcgcgtcgctcaag
ctggccagcggctgtgaccgacggtgcgccttctgtgccatccccgccttccgcggcgcg
ttcgtctctcgcccgccggaggcgctgctcgccgaggcggagtggctggccaggaccggg
gtgcgtgagctggtgctggtcagtgagaactccagctcctacggcaaggacctgggcgac
ccgcgggcgctggagaagttgctgccccagctcgccgcggtggacggcatcgtccgggtg
cgggcgagctacctccaaccggccgagactcgccccggtctggtcgaggcgatcgccacc
acgccgggcgtcgccccgtacttcgacctgtcgttccagcactccagcgaggcggtgctg
cggcgaatgcgtcggttcggctccaccgaccggttcctggagctgctgggcagcatccgg
gcactgtccccggaggccggcgcgcggagcaacttcatcgtcgggttccccggcgagacc
cgggctgacgtcgctgagctggtccgcttcctggaggaggcgcggctggacgcgatcggg
gtgttcgactacagcgacgaggacggcaccgaggccgccggtctgtccggcaaggtcacc
accgccaccgtcaagcgccgctacgaccggctcagcgcgctcgccgacgagctctgcgcg
cagcgggccgagcagcggctcggctcgacggtgcaggtgttggtcgactccgtcgacggc
ggtgtcgtggaaggccgtgctgcgcaccaggctcccgaggtggatggctcgaccaccctg
gtcgcgccggtcggtggcggggtggatctgactgccctgcgccccggtgacctggtggaa
tgcacggtcaccgccacggagggtgtggacctggtcgccgtaccggacgcgatgatctcg
gcggcgcctggcgtggcacggtga
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