Salinispora tropica: Strop_2820
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Entry
Strop_2820 CDS
T00504
Name
(GenBank) amino acid adenylation domain
KO
K12240
L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:
6.2.1.69
]
Organism
stp
Salinispora tropica
Pathway
stp01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
Strop_2820
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
stp01008
]
Strop_2820
Enzymes [BR:
stp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.69 L-cysteine---[L-cysteinyl-carrier protein] ligase
Strop_2820
Polyketide biosynthesis proteins [BR:
stp01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Pyochelin synthetase
Strop_2820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
Methyltransf_12
TubC_N
Thioesterase
Methyltransf_11
AMP-binding_C
Methyltransf_25
Methyltransf_23
PP-binding
Methyltransf_31
Methyltransf_24
DUF938
Methyltransf_16
HTH_65
HTH_51
Motif
Other DBs
NCBI-ProteinID:
ABP55261
UniProt:
A4X8R1
LinkDB
All DBs
Position
complement(3224953..3230157)
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AA seq
1734 aa
AA seq
DB search
MSQSSAGDLLAELESAGIRVWSEAGKLRFRAPQGVMTVERRDALRARRDEILAYLDAAAD
PAPLVPDPEHRHDPFPVTDVQAAYLLGRGETFAYGRVACHGYGELSYPELDPERMTAAWR
ALIDRHDMLRAVVEVDGAQRVLPEVPTFEVPVIDLTGRSPAVVEAALHAVRAEMDHLVHT
PDRWPLFAARITTADDRAVLHVSIDFLIADFISVQVILDELHRLYHRPNEPLPPLEITFR
DYQLAERAARSGPGHERDKRWWLARVDDLPAAPELPTVARPADSDGRFRRWETRMPPDAW
ALLRQRAGRHGISPSGAVLAAYADTIAAWSRRSRFTLDITLLNRMPLHPQVNALVGDFTS
VDLLAVDAEPTRPFHERARDVQAQLWEDLDHRSFSGIELLREIARRQGPEAALFPVVFTS
AIGISDAGSAAGGAPLGELGYGISQTPQVWIDCQNIERDGGLVSNWDVREEVFPPGLVED
MFAAYERLLHRLAIDDAAWTGTGYPEPPRAQLDRRAEVNRTTAPPPAGMLHDRVVRQALR
TPDRPAVVTVDGALSYAELLGRATGVAEALTAAGCRRQELVGIVTDRGWEQVVAVLGALL
AGCVYVPVDTSQPAARRRTILEAAGIRCALTQSWVEPSGWADGIRLLAVDTLPAGEPGPV
DGSGDPEELAYVIHTSGSTGTPKGVMINHRGALNTVLDINARFDVGPDDRVLGLSNLGFD
LSVYDIFGPLSVGGAVVLPDSSRRGDPSHWSALVAAHTVTVWNSVPAQLQMLYDYLEAAP
AATVPGLRLAMLSGDWIPVALPDQIRQRVPGLRVVSLGGATEASIWSIWYPIEQVEPEWR
SIPYGRPLTNQTFHVLDSALRPRPELVTGELYIGGVGLALGYLNDPARSADRFVTHPETG
ETLYRTGDLGRYLPDGTIEFLGREDLQVKIRGYRIELAEIETALGSHPGVAGAAVVVDGD
SPLERRLAAFVEPASRSVTTARATSEAAAAQQLGVQACADADGTLDGVDRARYLTYAHRL
DAVALPAMIDAFHASGLFVAGRRHTRAELLHTAGVAPRHHRLVRRWLRALTGAGLLDVDT
DDRYGLTETGAAADTDAAWRAVDKIATAEDAELLAYFRASTGQLPALLRGEDDPLTLLFP
QGKVDVSQGLYERTLFNRWANEAAASVVRRVADQRVEPGALRVLEIGAGAGGTTAAVLAA
LDGNAVDYLATDLSPFFVNELRTRFGERPGLHLQPLDIDQDLVAQGLAPNSFDVVVAGDV
LHASADVVRALARLRAVLAPQGWLVACEMTRDHHQIMTSLELLVRVDEATADFTDLRQGT
EQVFLGRERWLDVLGAAGASHPLCLPEPNGFIAELGMCVLAAQFKTDRVRIARDDVATHL
AERVPEYMVPAVVQIVDTFPLNPNGKVDRAALRRRLPRRESMPTTASSAPGSDLERGLAA
VWAEALRVPRVGRDENLFELGGDSLVAAQITGRVLNEIPQAANLFFDQVLRQVLEQPTVA
ALAGHIEAESAATTATDGVGTGATTSDGGLATLDDTNPGIPWVLVPSCDGSVDGYTALVP
HLAATGPVFGLTAGPLDDLPRVAAEQARSITGAGCAAVRLVGHGLGATLALEVARALTEA
GEQVAELVLISPWRPVTLPDAAEAHRAETGDAAIGEGFAARLAATVGYEPNLYAGDITVL
RPTGEVPYSTDELEFWSDLCLGEVRELDVDGDHRAVLGEKAVAAIAAAGSGAAR
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcgtccgccggtgacctgctcgcggagctggaaagtgcggggatccgggtg
tggtccgaggccggcaagctgaggtttcgggccccccagggtgtgatgaccgtggagcgc
cgcgacgcgctgcgcgcgcggcgggacgagatcctcgcgtacctcgacgcggctgccgac
ccagcccccctggtgcctgacccggagcatcgccacgatccgttcccggtcaccgacgtc
caggccgcgtacctgctcggtcggggggagaccttcgcctacggccgggtggcctgccac
ggctacggtgaactgagctatccggagctcgacccggagcggatgaccgccgcctggcgc
gccctgatcgaccggcacgacatgctgcgcgcggtggtcgaggtcgacggcgcacagcgg
gtgctgcccgaggtacccaccttcgaggtgccggtgatcgacctgacgggtcggtccccg
gcggtggtggaggcggcgctgcatgccgtccgcgccgaaatggaccacctcgtacacacc
ccggatcggtggccgttgttcgccgcccggatcaccacggccgacgaccgggctgtcctg
cacgtgtcgatcgacttcctgatcgccgacttcatcagcgtccaggtcattctcgatgag
ttgcaccggctgtaccaccgcccgaacgagccgctgccgccgttggagatcactttccgg
gactaccagttggccgaacgggcagcccgaagtggcccgggccacgaacgggacaagcgg
tggtggctggcccgggtcgacgacctgcctgctgcaccggaactgcccacggtggcccgc
cccgccgacagcgacggccggttccgtcgctgggagacccggatgccgccggatgcctgg
gcgctactgcgccagcgcgccgggcgtcacgggatcagcccgtccggggcggtgctggcc
gcctacgccgacacgatcgccgcgtggagtcgccggtcccgcttcacccttgacatcacc
ctgctcaaccggatgccgctacacccccaggtcaacgccctggtcggcgacttcacgtcg
gtagatctgttggcggtcgacgccgaaccgacccggccgttccacgagcgtgcccgcgac
gtacaggcacagctgtgggaggacctggaccaccgcagcttcagcggcatcgagttgttg
cgcgagatcgctcgtcggcagggcccggaagcggcgctgttcccggtcgtgttcaccagc
gccatcggcatctccgacgccgggtcggccgccggcggcgcccccttgggcgagctgggc
tacgggatcagccagactccgcaggtctggatcgactgtcagaacatcgaacgggacggc
ggtctggtgtccaactgggacgtccgggaggaggtcttcccgcccggactggttgaggac
atgttcgccgcgtacgagcggctgctgcaccgcctcgccatcgatgatgcggcatggacg
ggcaccgggtaccctgagccgccccgcgcgcagctcgaccgtcgggccgaggtcaaccgc
accactgcgccgccgcccgctgggatgctgcacgaccgggtggtccgacaggcgttgcgt
actcccgaccggccggcggtcgtgaccgtcgacggtgcgctgagctacgccgagctgctc
ggccgggcgaccggggtggccgaggcgttgaccgctgccggatgccgccgtcaggaactc
gtcgggatcgtcaccgaccggggctgggagcaggtcgtcgcggtactcggcgcgctgctg
gccggctgtgtctacgtcccggtggacacctcgcagccggccgcccgacgacggaccatc
ctcgaggccgccgggatccgctgcgccctgacccagtcctgggtcgagccgagcggctgg
gccgacgggatccggctgctcgcggtcgacacgctgccggcgggtgaacccggcccggtg
gacggctccggcgacccggaggaactggcctacgtcatccacacctccggttccaccgga
acacccaagggcgtcatgatcaaccatcgtggcgcactcaacaccgtgctcgatatcaac
gcccgcttcgacgtcggccccgacgaccgggtgctcggtctgtccaacctcggcttcgac
ctgtcggtgtacgacatcttcggcccgttgtcggtcggcggcgcggtggtgctgccggac
tcctcgcggcgcggcgacccgtcgcactggtcggcgctggtggcggcgcacacggtgacc
gtctggaactccgtccctgcccagctccagatgctgtacgactacctggaggccgcaccg
gcggccacggtccccggtctgcgactggcgatgctctccggcgactggatcccggtcgcg
ctgcccgaccagatccggcagcgggtgccgggcctgcgggtggtcagcctcggcggggcg
acggaggcgtcgatctggtcgatctggtacccgatcgagcaggtcgagccggagtggcgc
agcatcccgtacggccgcccgttgaccaaccagaccttccacgtgttggactccgcgttg
cgcccccgacccgagttggtcaccggtgagctgtacatcggcggggtcgggctggcgttg
ggctacctcaacgacccggcccgctccgccgaccggttcgttacccaccccgagaccggt
gagacgctgtaccgaaccggggatctgggccgctacctgcccgacgggaccatcgagttc
ctcggtcgggaggacctccaggtcaagatccgtggctaccggatcgagttggccgagatc
gagaccgcgctcgggtcacatcctggcgtcgccggtgcggcggtggtggtggacggggac
agcccgctggagcggcgcctcgccgcgttcgtcgagccggccagccggtcggtgaccacc
gcccgggctacctccgaggccgccgccgcgcagcagctcggtgtgcaggcgtgcgccgac
gccgacggtacgctcgacggcgttgaccgtgcgcgttacctgacgtacgcgcaccggctg
gacgcggtcgccctgcccgccatgatcgacgcgttccacgcgtcgggtctgttcgtcgcc
ggccggcggcacacccgagccgaactcctccacaccgccggcgtcgcgccgcgccaccac
cggctggtccgccggtggctgcgcgccctcacgggcgcgggtctgctcgacgtcgacacc
gacgaccggtatgggctgaccgagaccggggcagcggcggacaccgacgccgcgtggcgg
gccgttgacaagatcgccaccgccgaggatgcggagctgttggcgtacttccgcgccagc
accggccagctgcccgcgttgctgcggggcgaggacgacccgctgacgttgttgttcccg
cagggcaaagtagacgtttcccagggtctgtacgagcggaccctgttcaaccggtgggcc
aacgaggcggccgcctcggtggttcggcgtgtcgccgaccagcgagtcgagccgggtgcc
ctgcgggtactggagatcggtgccggggcgggcggcaccaccgccgcggtgctcgccgcg
ctcgacggcaacgcggtcgactatctcgccaccgatctgtccccgtttttcgtcaacgag
ttgcgcacccgcttcggtgagcgccccggcctgcatctgcaaccgctcgacatcgaccag
gatctggtggcgcaggggcttgccccgaactccttcgacgtggtcgtcgccggcgacgtg
ttgcacgccagcgccgacgtggttcgggcgttggcgcggctgcgtgcggtcctcgcaccg
caggggtggctggtggcctgcgagatgacccgggaccaccaccagatcatgacctcgctg
gagttgttggtccgggtggacgaggccaccgcggacttcaccgatctgcggcagggcacc
gagcaggttttcctgggccgggagaggtggctcgacgtgctcggtgcggccggtgccagc
catccgctgtgtctgcccgagccgaacggcttcatcgccgaactgggaatgtgtgtgctg
gcggcccagttcaagaccgatcgggttcggatcgcacgcgacgacgtcgccacgcacctg
gccgagcgggtaccggagtacatggttccggcggtggtgcagatcgtcgacacgttcccg
ctcaaccccaacggcaaggtcgaccgggccgcgctgcggcggcgcctgccccgtcgggag
tcgatgccgaccacagcgtccagcgcacccggcagtgatctggagcgggggctggcggcg
gtgtgggccgaggcgctgcgggtgccgcgggtcggccgggacgagaacctgttcgaactc
gggggcgactccctggtcgccgcgcagatcaccggtcgggtcctgaacgagatcccacag
gccgccaacctcttcttcgaccaggtgctgcgtcaggtactggaacagccaaccgtcgct
gcgctcgccggacacatcgaggctgagtcggcggctaccaccgcgaccgacggggtgggc
accggggcgacgacctccgacggggggttggcgacgctggacgacaccaacccgggtatc
ccgtgggtgctggtgccgagctgcgacggcagcgtcgacgggtacacggcactggtgccg
cacctcgcggccaccggcccggtgttcgggctgaccgcgggtcccctcgacgacctgccc
cgggtcgcggccgaacaggcccggtcgatcaccggggccggctgcgccgcggtccggttg
gtcgggcacggcctcggcgcgacgctcgcactggaggtggcccgggcgctgaccgaggcc
ggcgagcaggttgcggagctggtactgatctccccgtggcgtccggtgacgctgcccgac
gccgccgaggcgcatcgggcggagaccggcgacgcagcgatcggcgaggggttcgccgca
cggctcgccgcgaccgtcggctacgagcccaacctctacgccggtgacatcaccgtgctg
cggccgaccggtgaggtgccctactccaccgacgaactggagttctggtctgacctgtgc
ctcggcgaggtgcgggagctcgacgtcgacggcgaccaccgggcggtgctgggggagaag
gccgtggcagccatcgcggccgccggttcgggggcggcccggtga
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