Spirochaeta thermophila DSM 6578: Spith_0419
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Entry
Spith_0419 CDS
T02016
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spith_0419
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stq01007
]
Spith_0419
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stq03016
]
Spith_0419
Enzymes [BR:
stq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Spith_0419
Amino acid related enzymes [BR:
stq01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Spith_0419
Transfer RNA biogenesis [BR:
stq03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spith_0419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
Anticodon_2
tRNA-synt_1
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AEJ60703
UniProt:
G0GEL5
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Position
508047..509639
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AA seq
530 aa
AA seq
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MSIPQKPKSSHWADVTAFRIIKEKGDKPRYVCASGITPSGTVHIGNFREIISVELVVRAL
RDLGKDVRFIYSWDEYDVFRKVPKNMPNREDLETYLRMPITMVPDPWGKEESYARANEKE
VEAILPEVGIFPEYIYQAKEYTSCRYAEGIRRALERRDVIRRILDKYRAEPLPDSWWPVV
IFCASCHKDTTTVEHWDGAYGLSYTCSSCGFKEALDFRRQGNVKLRWRVDWPMRWREEQV
DFEPAGKEHHSDGGSFDTAKQIVREVYDHEPPVTFKYDFIGIKGQGGKISSSTGNVISLK
DVLEVYQPEVVRYLFAGTRPDTEFAISFDLDVIKIYEDYDKCERIYFGKEQVDPKKLERE
RRTYEFSQVERAPASMPLQVPFRHMTTLVQIYEGDLDALMAQEFPSVSGEEARRLRRRAQ
CAWNWVTTYAPEEFRFSLRVDEETLEPLEDSHRKVIQRLYHLLETEWDSLDEARLGEAVY
AFCEEEGLTAKDFFPSLYRVLLGKDRGPRAASFILTVGKEKILTILGRYL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagtataccacagaagccgaagagctcccactgggcggacgtcaccgccttcaggatc
atcaaggagaagggggacaagccccgatacgtctgtgcctcggggatcaccccctccggc
acggtgcatatagggaacttcagggagatcatcagcgtggagctggtggtgcgcgccctc
cgtgatctggggaaggacgtacgtttcatctactcctgggacgagtacgacgtcttccgt
aaggtgcccaagaacatgcccaacagggaggacctcgagacgtacctccgcatgcccatc
accatggtgccggatccgtggggtaaggaggagagctacgcgcgtgccaacgagaaggag
gtggaggcgatcctccccgaggtggggatcttccctgagtacatctatcaggcgaaggaa
tacacctcctgccggtatgccgaggggatccgtcgggccctcgaacgacgtgacgtgatc
cgccgtatcctcgacaagtaccgcgcagagccgcttccggactcgtggtggccggtggtg
atcttctgcgcctcgtgtcataaggacaccaccaccgtggagcattgggacggcgcctac
gggctctcgtacacctgcagttcctgcgggttcaaggaggccttggacttcaggagacag
gggaacgtgaagctgcgctggagggtggactggcccatgcggtggcgcgaggagcaggtg
gacttcgaaccggccggtaaggagcaccactcggacggtgggtccttcgacaccgcgaaa
cagatcgtgcgtgaggtgtacgaccacgagccgcctgtcaccttcaagtacgacttcata
gggatcaaggggcaaggggggaagatctcgtcctccaccgggaacgtgataagcctcaaa
gacgtgctcgaggtgtaccagcccgaggtggtccgctacctcttcgcagggaccaggccc
gataccgagttcgccatctccttcgatctcgatgtgataaagatctacgaggactacgac
aagtgcgagcggatctacttcgggaaggaacaggtcgaccccaagaagctcgagcgggaa
cggaggacgtacgagttttcccaggtggaacgcgctcctgcctccatgcccctccaggtc
ccgttccggcacatgaccaccctggtgcagatctacgagggcgatctcgatgccctcatg
gcgcaggagttcccctcggtctcgggggaggaggcccggcggcttcgaaggcgggcgcag
tgcgcctggaattgggtgaccacctacgcccctgaggagttccggttcagcctcagggtg
gacgaggagaccctcgagcccctcgaggattcccacaggaaggtgatccagaggctctac
catctcctggaaacggagtgggactccctcgacgaggcgagactgggcgaagccgtctat
gccttctgcgaggaggagggcctcaccgcaaaggatttcttcccctcgctctaccgggtg
ctcctcggcaaggacagggggcctcgggcggcgagcttcatcctcaccgtgggtaaggag
aagattctcaccattctcggccgctacctctag
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