Streptococcus sp. NPS 308: SNAG_0420
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Entry
SNAG_0420 CDS
T05541
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNAG_0420 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strn03021
]
SNAG_0420 (rpoE)
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_0420 (rpoE)
Transcription machinery [BR:
strn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SNAG_0420 (rpoE)
DNA repair and recombination proteins [BR:
strn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SNAG_0420 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
BAV79322
UniProt:
A0A1E1G972
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All DBs
Position
388675..389280
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AA seq
201 aa
AA seq
DB search
MRRNALELEVFAGQEKSELSMIEVARAILELRGRDHEMHFSDLVNEIQNYLGTSNSDIRE
ALPLFYTELNFDGSFISLGDNKWGLRSWYGVDEIDEEIIALEESDDDEVAPKAKKKRVNA
FMDGDSDAIDYNADDPEDEDAYEADPALSYDDENPDDEKNEVEAYDAEINEIAPDDLGED
VDLNEEDDEFSDDDAETSEEE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaacgctttggaattagaagtatttgctgggcaagaaaaaagtgaactatct
atgattgaggtagcgcgtgctatcttggaacttcgtggtcgcgatcatgagatgcatttt
agcgatcttgtaaatgaaattcaaaactaccttggaacatcaaacagcgatatccgcgaa
gctttgcctttgttctacacagagttgaactttgacggtagcttcatctctcttggagac
aacaaatggggtcttcgttcatggtatggtgtggacgaaatcgacgaagagatcatcgct
cttgaagaaagtgacgacgatgaagtagcaccaaaagctaagaaaaaacgcgtcaatgcc
tttatggatggcgattcagatgccattgactacaatgcagatgatccagaagacgaagat
gcatacgaagcagatccagctctttcatacgatgatgaaaatccagatgatgagaaaaat
gaagtggaagcttacgatgcagaaattaacgaaatcgctcctgatgacttgggtgaagat
gtggatcttaacgaagaagacgacgagttttctgacgatgacgctgaaacgagtgaagaa
gagtaa
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