Streptococcus salivarius NCTC 8618: SSAL8618_00485
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Entry
SSAL8618_00485 CDS
T03511
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
strs
Streptococcus salivarius NCTC 8618
Pathway
strs03030
DNA replication
strs03430
Mismatch repair
strs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSAL8618_00485 (polC)
03430 Mismatch repair
SSAL8618_00485 (polC)
03440 Homologous recombination
SSAL8618_00485 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strs03032
]
SSAL8618_00485 (polC)
03400 DNA repair and recombination proteins [BR:
strs03400
]
SSAL8618_00485 (polC)
Enzymes [BR:
strs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSAL8618_00485 (polC)
DNA replication proteins [BR:
strs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSAL8618_00485 (polC)
DNA repair and recombination proteins [BR:
strs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSAL8618_00485 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
YhfH
DnaA_N
Motif
Other DBs
NCBI-ProteinID:
AIY20293
UniProt:
A0A3S4QFH5
LinkDB
All DBs
Position
76454..80848
Genome browser
AA seq
1464 aa
AA seq
DB search
MSDKFQLLLKQIRFPEDHDAFKEIKDGSIETVKLFKSKRQWFFVFSFPSVLSYESFALFD
SLLHSSFNSLGAKASFEIRLVSTACDDSLLGDYFSYALDSLKVSHFSTYSLFSNLKVEIS
NNSIFVKAPEHIIKENVQDRFISLISKSLSQVGLSDVSISVVEDKEASSSLEEAYQTNKV
SLQEQAESQARQALQSILESAPAPKPVTEPSQNFAEKQSQRQASFDKAEITPMVDINSEE
NRVVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSDELAKFDMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAMPTVENL
IDTAASWGHPAVAITDHANVQSFPHGYHRAKKAGIKAIFGLEANLVEDKVPIVYNSQNLE
LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIIEQFDEFIDPGHPLSAFTTELTGI
TDNHVKGAKPLVQVLQEFQEFCQGTVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE
FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFDKHGLTNLEQ
LNTDLVSEDSYKKSRVKHATLYVQNQTGLKNIFKLVSLSNVSYFEGVARIPRTVLDEYRE
GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEAAIEQ
LIRDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKGENAKPAP
LPEAHFRTTNEMLDDFAFLGKDLAYEIVVTNTQAMADQIEEVEVVKKDLYTPFIDRAEEQ
VAEMTYARAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPNCQHSEFITDGSYGSGFDLPDKECSECGTEYK
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYNKFYRDAEVDRLAMGAAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL
FSGTDILGVTPEQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNC
YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA
KAFELKTMSAGLDAVKARMEDIKEKRQRNEATNVENDLFTTLEIVNEMLERGFTFGQLDL
YKSQATEFLIEGDTLIPPFIALEGLGENVAKQVVAAREEGEFLSKTELRKRGGLSSTLVE
KLDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaatttcagcttctcttaaaacaaattcgttttcctgaggatcacgatgct
tttaaagaaattaaagatggttctatcgaaacagtaaagctatttaaatcaaaacgccaa
tggttctttgttttttcttttcctagtgttctgtcttatgagtcttttgctctttttgat
agtttacttcactcttcttttaattctttaggtgctaaagcttcttttgagattcgttta
gtttctactgcttgcgatgattctttacttggagattatttttcatatgctttagatagt
ttaaaagtgtcacacttttctacttattctttattctcaaatctaaaggttgagatttcg
aataatagtatttttgttaaagctccagagcatattataaaggaaaatgtacaggataga
tttatttctttgatatctaaatctctttctcaagttggtttatctgatgtatccatttct
gttgtcgaagataaggaagcttcatcttctttagaagaggcttaccaaacaaataaggtt
tctttacaagaacaagccgagtctcaagcaagacaagcgcttcaatctattcttgaaagt
gccccagcaccgaaacctgtgaccgaaccatcacaaaattttgctgagaaacaaagtcaa
cgtcaagctagttttgataaggctgaaataacgccaatggttgatattaattctgaagaa
aatcgtgttgtttttgaaggatatatttttgatgtagagcaacgtgaaacaaagacgggt
agaattattattaattttaaggtaactgattatacctctagttttgctatgcaacgatgg
gtcaaagatagtgatgagctcgctaagttcgatatgataaaaaaggggaactgggttagg
gttcgtggccgtatcgagaataatcctttcactcatagtctgactatgaatgtgcaagat
attaaagagatttctcatactcctcgtaaggatttgatgcctgagggacaaaagcgtgtg
gaatttcatgcgcataccaacatgtcgactatggatgcaatgccaactgttgaaaatctt
attgatacagcggcttcttggggacatccagcagttgccattactgaccatgctaatgtt
cagagttttcctcatggctaccatagggctaagaaagctgggattaaggctatttttggt
cttgaagccaatcttgttgaggataaagttcctattgtttataattcccagaatttggaa
ttaaaagaagcaacttatgttgtatttgacgttgagacaacgggcttgtctgctgttcat
aatgatttgattcagattgcggcatcaaaaatgcataaaggtaatattattgagcaattt
gatgaattcatagatccaggacatcctctttctgcatttactactgagttgaccggtatt
actgataatcatgttaaaggtgctaaacctttagtgcaagttttacaggaatttcaagaa
ttctgtcaaggaactgtgctagtggcccataatgcgacctttgacgttggttttatgaat
gccaattacgaaagacatcagttaccaacaatttcacaaccggttattgatactttagaa
tttgcacgaaatctttatcctgagtataagcgtcatggtttggggcctttgacgaagcgg
tttggtgtggctttggatcatcaccatatggccaattatgatgcggaagctactggtcgt
ttgttgtttatcttcataaaagatgtgtttgataagcacggtttgactaatctggaacag
ttgaatacggatttggtttccgaagattcgtataaaaagtctcgtgtcaaacatgcgacg
ctgtatgttcagaatcaaactggcttgaagaatatctttaagttggtaagtttatcaaat
gtctcatactttgagggagtagcacgtattcctcgtacggtcttagatgagtatcgtgag
ggaatcattgtaggttctgcttgtgctgatggtgaggtttttgatacgcttctgtctcac
ggtattgacaaggcggttgaagttgctaaatattatgactttattgaagttatgccaccg
gcaatttatgcgcccttgattgcaaaggatttaatcaaggatgaggcggctatagaacaa
ctgattcgggatttaattgaagtcgctaatcgtctggacaaacctgtgctggctacagga
aatgtacactatatcaaccctgaggatgccatttatcgtgaaatcattgttcgtgctttg
ggacaaggagccatgattaataggccaattggtaagggagaaaatgcgaaacctgctcct
ttacctgaagctcattttaggacaactaacgagatgctagacgactttgcctttttagga
aaagacttagcctatgaaattgttgtaactaatacgcaggctatggcagatcaaattgaa
gaggttgaggttgtcaaaaaagacttgtacacacctttcattgatcgtgcggaagaacag
gttgcggagatgacatatgctagagcgtttgagctctatggtaatcctttgcctgatatt
attgacctgcgaattgagaaagagttgtcttcaattcttggtaatggttttgccgtaatc
tacctggcttcgcagatgctagttaaccgttcaaatgaacgtggctacctagttggttcg
cgtggatctgtcggttctagttttgttgcgacgatgattggaattactgaggtcaatccg
atgccgccacattatctctgtcctaattgtcaacactcagagttcattacagatggatct
tatggatctggcttcgatttgcctgataaggaatgttcagaatgtggaacggaatataaa
aaagatggtcaggatattcctttcgagaccttcctaggttttgatggggataaggttcct
gatatcgatttgaacttctccggtgatgatcaaccatcagcccacttggacgttcgtgat
atttttggagagcaatatgcttttcgtgccggaacagtaggaactgttgcagatcggacg
gcttatggttttgttaaaggttacgaacgtgattacaataagttttaccgtgatgccgag
gtcgatcgtttagccatgggggctgcgggtgttaagcgaaacacaggtcagcacccgggt
ggtattgttgttattccaaattatatggatgtctatgatttcacacctgttcaatatccg
gcagatgatgtaacggctgcctggcagacgactcactttaacttccacgatattgatgag
aacgtgttgaagcttgatattctgggacatgatgatccgactatgattcgtaagttgcag
gatttatcaggaatcgatccaaaagatattcgagcagatgatccagatgtaatgaaactt
ttttcagggactgatattttaggggtaacacctgaacagattgggacaccaacgggaatg
ttgggaatccctgagtttgggactaactttgttcgtggtatggtcgacgagacgcatccg
acgacctttgcggaactcttacagttatctggtttgtcccacggaacagacgtttggtta
ggtaatgcacaagatttgattaaggaaggtatcgccactctgaaaacagttatcggttgt
cgtgatgatatcatggtatacctaatgcatgcgggattagatcctaagatggccttcaca
atcatggaacgtgtgcgtaaggggatgtggttgaagatttccgaagaagagcgtaattgc
tatattcaagctatgcgtgaaaataatgttccagactggtacattgaatcttgtggtaaa
atcaagtacatgttccctaaagcccatgcggcagcctacgttatgatggccctacgtgta
gcttatttcaaagtgcaccatcctatttattactattgtgcctacttctcgattcgagct
aaagcatttgagcttaagacgatgtctgcgggtcttgatgctgttaaagctcgaatggaa
gatattaaggagaagcgccaacgaaatgaagcgactaatgttgaaaatgacttatttacg
acgcttgaaattgtcaatgaaatgttagaacgtggctttacctttggtcagttggatctt
tataagagtcaggcaactgaatttttgattgaaggagataccttgattccaccgtttatt
gcacttgaaggtttgggtgagaatgttgctaagcaagtggttgctgcgcgtgaagaaggg
gagttcctttccaagacagaattgcgtaaacgaggaggcctatcatcaaccttggttgaa
aaattggatgaaatgggaatcctaggaaatatgccagaagataatcaattaagtcttttt
gatgatttcttttaa
DBGET
integrated database retrieval system
