Salmo trutta (river trout): 115147307
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Entry
115147307 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115147307
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115147307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115147307
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115147307
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115147307
NCBI-ProteinID:
XP_029545347
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All DBs
Position
14:complement(72520196..72649738)
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AA seq
1848 aa
AA seq
DB search
MYKVLHLHSSTMLVSLLSPSPLQDRRVTSSFPPPPPEHTSSPHQHPRLALPSLSLPLSLS
LLLLSLFLLPICESARSPGRGGAGQGGGAPGGAPGTGGAGGEKGGQRGTNLIPPHYPPYY
PPVSPARPPAPPLPPKVASSLSIAVILVGNSSEVSSTYVEKEEFLHVPHPTKVQLETMND
TDPKSIINRICTLMTNTWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMA
AKDDHSMFFQFGPSIEQQASIMLKIMEEYDWYIFSIVTTYYPGYQDFVNKIRSTIENSFV
GWELEEVLLLDMSVDDGDAKIQNQMKKLQSPVYLLYCTKEEAYTIFEVANSVGLTGYGYT
WIVPSLVAGDADNVPAVFPTGLISVSYDEWDYSLEARVRDAVAVIAMATSTMMLDRGQHT
LLKSGCNETPNKKGSKQGNSNEVLKYLMNVTFEGRNLSFSEDGYQMHPKLVITLLDKQRR
WDKVGKWENSSLSMKYHVWPRFELFSDGEAREDDHLSIVTLEEAPFVIVEDVDPLSGTCM
RNTVPCRKQLKILNQTVPGQYTKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKIN
GTWNGMVGEVEQKKAHMAVGSLTINAERSEVIDFSVPFIETGISVLVSRSNGTVSPSAFL
EPFSADVWVMMFVMLLLVSAIAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG
LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDNKF
QKPNAFSPPFRFGTVPNGSTERNIRNNYPEMHQYMTSFHQKNVDEALASLKGGKLDAFIY
DAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEE
LEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHAFYWQLRFCFM
GYCTGKPGFTFSISRGIWSCIHGVQIEENKSAMDSPSATMNMNMNNTHSNILRLLRTAKD
MTAIPGVNGSPHTHGALDYGGHHRGGGESPSIYDISDHRRSLQERKAPPPPYLPEDNMFS
DYISEVERTFGNLPLKDNNLYQDHYLHHHSGPGPGLALGMSGPPPIRPSSLGSTSSLEGG
MFDCDSLGGGVAPIFTTQPRVASLTHRNTNKFDLIADHTSASGSGQQGGQFKSNDLYGRF
SFKGGASSSGFIDRGGHDRYCMGGGGGGGGGSGGDDVSDISSHTITYGNLEGNAKRRKQY
RDSLKKRPHSAKSRREQDEIDYRRRAHHHHTVHHHFSRGPLGHRSASPPLVPSERKRGGG
GGGGGGGGNSSPYLFRDKENLREFYAEQFHSKEGSAKWEHVDMSDGPCPMGSRGGGVGGG
NSGSGICKSLVPVEDFLKGNKPKKSESKSGVVGGMGLGLSGQQAHTCWEKNMSEVGGGGI
AGGDWECRNHSGGGGGGGKSISHHGGGGTCTHGSASGGGGGGGGSASGGGGNSRPSSATC
KRCESCKKPGNLYDISEDNLIFSQIGGGGGKSGDVGGAGQSQSHAQRRKLGPGGRVLRRQ
HSYDTFVDLQKGGGGGRMGGGGGGGGGGGGGGGGGQLLPPRSVSLKDKDRYMEGVSPYAQ
MFAQYAERDRDSPSFFSRGGSERERAKGGSSFSLFRGERGEGGLHRRSVGEKDMRDRDRR
MMGGGGGGGGGGSGKGARTYSLSKSLYPDKVTQNPFIPTFGDDQCLLHGGKPYYVKMSPQ
QQQQPPQHLLNNSRGDFRGSMGVPSYLPASATTGVMSNVTPRFPNDLCLGGGLGGPMGNH
HGPRLGGNKLLPVRDGGLGLVGQGGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggtactgcatttacactcctccacgatgcttgtcagcctcctctccccctcc
ccactccaggacaggcgcgtcacctcctccttcccccctcctcctcccgaacacacctct
tcccctcatcagcatcctcggctggcccttccctccctctccctccctctctccctatct
ctcctcctcctctccctattcctcctgcccatctgcgagtcggcgcggtcgcctgggagg
ggcggagctggccagggcggaggagcaccaggaggagcacccgggacgggaggagcagga
ggcgagaaaggaggccagaggggcacaaacctcatcccccctcactaccccccttactac
cccccagtatcccccgcccggccccctgcgcccccattaccccccaaagtggcctcctct
ctcagcatcgccgtcatcctggtgggcaactctagcgaggtgtcgtccacctacgtggag
aaagaggagttcctccatgtaccccaccctaccaaagtccaactggagaccatgaatgac
acggaccccaagagcatcatcaaccgtatctgcaccctgatgaccaacacctggctgcag
ggggtggtgttcggggatgacacggaccaggaggccatcgcccagatcctggacttcatc
tctgcccagacacacatccccatcctgggcatccgaggaggctcctccatggtcatggct
gccaaggacgaccactccatgttcttccagtttggcccgtctatagagcagcaggcctcc
atcatgctgaagatcatggaggaatacgactggtacatcttctccatcgtcaccacctac
taccccggataccaggactttgtcaacaaaatccggagcaccatagagaacagttttgtg
ggctgggagctagaagaagtcctccttttggacatgtctgtggatgacggagacgctaag
atccagaaccagatgaagaagctgcagagccctgtctacctgctttactgcaccaaggag
gaggcctacaccatctttgaggtggcaaactctgtgggactgacgggatacgggtacacc
tggattgtaccgtcgctagtggccggcgacgccgataatgtccccgccgtgtttcccaca
gggctaatttcggtgtcgtatgatgaatgggactacagtttggaggctcgggtgcgggat
gcagtggctgtcatcgccatggcgacctccaccatgatgctggaccgggggcaacacaca
ctgctcaagtcaggctgcaacgagacccctaacaagaagggctccaaacaaggcaactct
aatgaagtgctcaagtatctgatgaacgtgacgttcgagggacgtaacctgtcgttcagt
gaggatggataccagatgcatcccaaactggtcatcaccctgctagacaagcagagacgc
tgggacaaggtgggtaagtgggagaacagctccctgtccatgaagtaccacgtgtggccc
aggttcgagctgttctccgatggggaggcccgggaggatgaccacctgtccatcgtgacg
ctggaggaggctccctttgtcatcgtggaggacgtggaccccctcagtggcacctgcatg
aggaacaccgtgccgtgcaggaaacagcttaaaatactcaaccagacagtacctggccag
tacaccaagcgctgctgtaaaggtttctgcatcgacatcctgaagaagatcgccaagcag
gtcaagttcacctatgacctctacctggtcaccaatggaaagcacggcaagaagatcaac
ggcacctggaatggaatggtcggggaggtggagcagaagaaggcccacatggccgtgggg
tcactcaccatcaacgcggagaggtctgaggtcattgacttctctgtgcccttcatcgag
acggggattagtgtcctggtctcccgtagcaacggcactgtctccccctccgccttcctt
gagccgttcagtgcggacgtgtgggtgatgatgtttgtgatgctgctgctcgtgtcggcg
attgctgtgtttgtgtttgagtacttcagcccggtcggctacaaccgctgcctggcagac
ggacgagagcccggtggcccctccttcaccattggcaaggccatctggctgctgtggggc
ctggttttcaacaactctgtccccgtccagaaccctaaaggcaccaccagtaagatcatg
gtgtcggtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggct
gccttcatgatccaggaggagtatgtggaccaggtgtcgggcctcagcgacaataagttc
caaaaacccaacgccttctccccgccattccgtttcggaacggtgcccaacggaagcacg
gaacggaacatccgcaacaattacccggagatgcaccagtatatgaccagcttccaccag
aagaacgtggatgaggccctggcaagcctcaagggaggtaaattggatgccttcatctac
gatgccgctgtgttgaactacatggccgggagggacgagggctgtaaactggtgaccatc
ggcagcgggaaggtgttcgccaccaccggttacggcatcgccatccagaaggactctggc
tggaagagagcagtggacctggccatcctcatgctgttcggcgatggagagatggaggag
ctggaggctctgtggctgacggggatctgccacaacgagaagaacgaggtgatgagcagc
cagctggacgtggacaacatggcaggtgtcttctacatgctgggggcggccatggctctg
tcgctcatcaccttcattgccgagcacgccttctactggcaactgcgcttctgcttcatg
ggctactgcaccggcaagccaggctttaccttctccatcagcaggggcatctggagttgt
atccacggggtccagatcgaggagaacaagtcggccatggactctccatcggccaccatg
aacatgaacatgaacaacacccactccaacatcctgcgactgctccgcacagccaaggac
atgaccgccatcccgggggtcaacggctcgccgcacacgcacggcgccctggactacggt
ggccaccaccgtggcggcggcgagtcgcccagcatctacgacatatctgaccaccggcgc
agcttgcaagagcgcaaggccccgccgccgccctacctacccgaggacaacatgttcagc
gactacatcagcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctg
taccaggaccattacctgcaccaccactcaggcccgggacccgggctggctctgggtatg
tccggccccccgcctatcaggccgagtagcttaggcagtaccagttcattggagggaggg
atgtttgattgtgacagtttagggggaggggtagcgcccatattcaccacacagccccgc
gttgcctccctgactcacaggaacaccaataagtttgacctgatcgccgaccacacctcg
gcctcaggctccggtcagcaggggggtcagttcaagtcgaacgacctctacgggaggttc
tccttcaaaggcggggcgtccagttctgggtttatcgacaggggcggtcacgacaggtac
tgcatgggtggaggaggagggggtggcgggggctcggggggcgatgatgtgtcggatata
tcctcacacaccatcacctacggcaatctggagggcaacgccaagaggcgtaaacagtac
agggacagcttgaaaaagaggccccactcagccaaatccagacgggagcaggacgagatt
gattaccggaggcgagcccaccaccatcacaccgtccaccaccacttctcccgcgggccc
ctgggacaccgctcggcctccccacccctggtcccctctgagcggaagagaggaggaggt
ggaggaggtggaggaggagggggtaactcttcaccttacttattccgcgacaaagaaaat
ctgagggagttctatgcggagcagttccattccaaggagggctctgccaagtgggagcat
gtggatatgtccgacgggccttgtccgatgggcagtaggggaggaggagtcggtggcggt
aatagtggtagtggcatttgtaagagcctagtgcccgtggaggatttcctgaaaggtaac
aaacccaagaagtcagagagtaaaagtggcgtagtcggaggaatgggcttggggttgtca
ggacaacaggcccacacttgttgggagaagaacatgtctgaagtggggggtggaggcata
gcagggggtgactgggagtgtcggaatcacagtggtggtggcgggggaggagggaagtcc
atctctcaccatggaggagggggcacctgtacgcatgggagcgctagtggcggaggggga
ggagggggtgggagcgctagtggcggagggggaaatagtcgtccaagctctgctacttgc
aaacggtgcgagtcgtgtaagaaaccaggcaacctgtatgacatcagtgaagataacctc
atatttagccagattgggggtggaggggggaagagtggtgatgtggggggtgctggccaa
tcacaaagtcatgcacagcgcaggaagctagggccaggtgggcgggtgttacggaggcaa
cactcctacgacacgtttgtggatttgcagaagggggggggcggcggacgcatgggcggg
ggtggaggaggaggtgggggaggagggggaggagggggaggggggcagctcctcccaccc
agaagcgtgagcttgaaagacaaagaccgctacatggagggcgttagcccatacgcccaa
atgtttgcccagtacgcggagagggacagagatagtccctcctttttcagtcggggtggt
agtgagcgggagagggcgaaaggaggctcctccttcagtttgttccgaggcgaacgaggc
gaaggtgggttgcaccgtcggtcggtgggggagaaagacatgagggacagggatagaaga
atgatgggaggtggaggtggaggtggtgggggcggtagtggaaaaggggccaggacttac
tccttgtctaaatctctctacccagataaggtgacccagaaccccttcatcccaaccttc
ggcgatgaccagtgtctattacatggcggcaaaccgtactacgtcaaaatgtctccacag
caacagcaacaaccgccacagcatctcctcaacaacagccgcggggacttccgaggctcc
atgggggtgccttcatatttgccggcgtcagccacaacgggggtcatgtccaatgtgacc
cccaggttccccaatgatctgtgtctcgggggagggttgggggggcccatggggaaccac
catggtcccagactgggaggcaacaagctactgccggtcagggacggggggttagggttg
gtggggcagggcggccagagacccttcaatggctcgagcaacggccacgtttacgagaag
ctctccagcatcgagtctgacgtctga
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