Salmo trutta (river trout): 115151625
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Entry
115151625 CDS
T08542
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115151625 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115151625 (vcam1)
04091 Lectins [BR:
stru04091
]
115151625 (vcam1)
CD molecules [BR:
stru04090
]
Proteins
115151625 (vcam1)
Lectins [BR:
stru04091
]
I-type lectins (Siglecs)
115151625 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
C1-set
ICAM1_3_5_D2
ICAM_N
REJ
Ig_C17orf99
Pedibin
Motif
Other DBs
NCBI-GeneID:
115151625
NCBI-ProteinID:
XP_029551572
Ensembl:
ENSSTUG00000002439
LinkDB
All DBs
Position
17:complement(13497819..13510451)
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AA seq
806 aa
AA seq
DB search
MSLLWILILPVTAFAFHVELKPKSAFFRVGDRQELQCSVKDCNEKVTMSWALLGDKPMFA
KIHTSGSESVAAFDPVMTVHDDILLCKVSCGALTKQQRVVVKVYSFPEAPVISGYDHLLL
GQSNTLTCEVIDAYPAEHLRLEWLRGDSMLQTDVESVVSTYRFMPTPEDKEASITCRASH
DQDGVPDEEKTKETTVSLTVLYAPQNISISEPTAVRVGSSLTLSCHAEGSPRPDTQWKAI
GPDGQAVIVGQSEELVLTEMTLVDSGQYECVVSNTIGNITASVNILVQAPPTNTTITVSP
ASEVKEGESVTVSCLSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTLSSALLADSALY
QCQAFNEHGSQKVSALLSVEEYPLEVAMDVGVTAEMGSNLVLSCRALGCPQPAFYWRSML
DMPVHSRAHTQDSLSHLHLGPLGLVNEQAYTCEAKCGSVIKAKHAEVKVFSFPSDPIIEN
TGPFLEHGVGTFFCSVADVYPASLLQIQWLDGEIELASEMGQYSSELQNVTSTLSFSVGP
EDQGRQITCRVSLQMDEIPQSGRERQAVTVLELHYAPRGTTITVSPASEVKEGESVTVSC
LSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTRSSALLADSALYQCEAFNEHGSQRAS
THITVKAPPRNTTVLIYPSAEVQEGQNVTICCRSVSFPPPAVVLRKLDNGTELYSPDGNF
LLVNLVPNDTGLYQVNVTNDLGYETEIFSINVIEKHSSTSPDWNHIVIPAVCVGIMVTTT
GLVLDYLRRARRKGFYELAKCKPGSA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttatggatattgatactaccagtaacagcctttgcatttcatgtggagcta
aaaccaaagagtgcatttttcagagttggtgataggcaggagctgcaatgttcggtgaag
gattgtaatgaaaaggttactatgtcctgggctttgctgggggataagcccatgtttgct
aaaatacacacctcagggtcggaatccgtggcggcctttgaccctgtgatgacagtacat
gatgacattcttctctgcaaagtcagttgcggagcattgaccaaacaacagcgtgtggtt
gtcaaagtgtactcatttccagaggctcctgtcatatcaggctacgaccatcttctcttg
ggccagtccaacactctgacatgtgaggtgatagacgcttatcccgcggagcacctgcga
cttgagtggctgcgaggagacagcatgctccagacagatgtagagtccgttgtatctacc
tacaggttcatgcccaccccagaggacaaagaggcaagcatcacatgcagagcctctcac
gatcaggatggtgtgcctgatgaagagaagaccaaggaaaccactgtgtctctcacagtg
ctttatgcaccacagaatatatcaatatctgagccgactgctgtgagagttggctccagt
ctcacgttgtcgtgccatgctgaagggagccccagaccagatacacagtggaaggccatt
ggtccagatggacaggctgttattgtggggcagagcgaggagcttgttcttacagagatg
acactggtggattctggtcaatatgagtgtgtggtgagcaacaccattggaaacatcaca
gccagcgtgaacatccttgttcaagctcccccaaccaacaccaccatcacagtgagccca
gccagtgaggtgaaggaaggggagagcgtgacggtgtcctgcctgtcggacggagctccg
gtgggacgtatggtgctgaggagactctctgaggaccaggatgtagaactccagtccagc
aacggctcctccacctccttcaccctctcctctgccctgctagcagactctgctctctac
cagtgccaggccttcaacgaacacggcagtcagaaagtcagcgccttgctctctgttgaa
gagtatcccctggaggtggcgatggatgtgggggtgacggctgagatgggatccaacctg
gtgctctcctgccgggctttgggctgtccccagccagccttctactggaggagcatgctg
gacatgcccgtccatagccgtgcacacacccaggactccctctcccatctccacctgggc
ccacttgggctggtcaacgagcaagcctacacctgtgaggccaagtgtggctctgtcatc
aaggccaagcacgctgaggtcaaggtcttctctttcccctcggaccctatcatcgagaac
actggcccctttctggaacacggtgtcggcacctttttttgttcggtagccgacgtctac
ccagccagtctcctgcagatccagtggctcgatggggaaatcgagctagcctccgagatg
ggacagtattccagtgaactccagaatgtgacgtcaacgctttctttctcggttggaccg
gaggaccagggcagacagatcacctgcagagtcagtcttcagatggacgaaatccctcag
agtgggagagagaggcaggcggtgactgtactggagctccactatgcccccaggggaacc
accatcacagtgagcccagccagtgaggtgaaggaaggggagagcgtgacggtgtcctgc
ctgtcggacggagctcctgtgggacgtatggtgctgaggagactctctgaggaccaggat
gtagaactccagtccagcaacggctcctccacctccttcacccgctcctctgccctgcta
gcagactctgctctctaccagtgcgaggccttcaatgagcacggcagccagcgagctagc
acacacattacagtcaaagcacctcctaggaacacaacagttctgatatatccatctgct
gaggtgcaggaaggccaaaatgtcacaatctgctgtcgctctgtcagtttccccccacct
gctgtggttttaaggaaactggataatggcacagagctctactccccagatgggaacttc
ctgctggttaaccttgtgcccaatgatacaggcttataccaggtgaatgttaccaatgac
ctgggttacgagaccgagatcttcagcatcaacgtcatagagaagcactccagtacttca
ccagactggaaccacatagtcattcctgctgtctgtgtgggtatcatggtgaccaccacg
ggcctagtcctggactacctgaggagagccaggaggaagggcttctatgagctggccaag
tgtaagcccgggtctgcatag
DBGET
integrated database retrieval system