KEGG   Salmo trutta (river trout): 115151625
Entry
115151625         CDS       T08542                                 
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
  KO
K06527  vascular cell adhesion molecule 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115151625 (vcam1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:stru04090]
    115151625 (vcam1)
   04091 Lectins [BR:stru04091]
    115151625 (vcam1)
CD molecules [BR:stru04090]
 Proteins
  115151625 (vcam1)
Lectins [BR:stru04091]
 I-type lectins (Siglecs)
  115151625 (vcam1)
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig C2-set_2 C1-set ICAM1_3_5_D2 ICAM_N REJ Ig_C17orf99 Pedibin
Other DBs
NCBI-GeneID: 115151625
NCBI-ProteinID: XP_029551572
Ensembl: ENSSTUG00000002439
LinkDB
Position
17:complement(13497819..13510451)
AA seq 806 aa
MSLLWILILPVTAFAFHVELKPKSAFFRVGDRQELQCSVKDCNEKVTMSWALLGDKPMFA
KIHTSGSESVAAFDPVMTVHDDILLCKVSCGALTKQQRVVVKVYSFPEAPVISGYDHLLL
GQSNTLTCEVIDAYPAEHLRLEWLRGDSMLQTDVESVVSTYRFMPTPEDKEASITCRASH
DQDGVPDEEKTKETTVSLTVLYAPQNISISEPTAVRVGSSLTLSCHAEGSPRPDTQWKAI
GPDGQAVIVGQSEELVLTEMTLVDSGQYECVVSNTIGNITASVNILVQAPPTNTTITVSP
ASEVKEGESVTVSCLSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTLSSALLADSALY
QCQAFNEHGSQKVSALLSVEEYPLEVAMDVGVTAEMGSNLVLSCRALGCPQPAFYWRSML
DMPVHSRAHTQDSLSHLHLGPLGLVNEQAYTCEAKCGSVIKAKHAEVKVFSFPSDPIIEN
TGPFLEHGVGTFFCSVADVYPASLLQIQWLDGEIELASEMGQYSSELQNVTSTLSFSVGP
EDQGRQITCRVSLQMDEIPQSGRERQAVTVLELHYAPRGTTITVSPASEVKEGESVTVSC
LSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTRSSALLADSALYQCEAFNEHGSQRAS
THITVKAPPRNTTVLIYPSAEVQEGQNVTICCRSVSFPPPAVVLRKLDNGTELYSPDGNF
LLVNLVPNDTGLYQVNVTNDLGYETEIFSINVIEKHSSTSPDWNHIVIPAVCVGIMVTTT
GLVLDYLRRARRKGFYELAKCKPGSA
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtctctgttatggatattgatactaccagtaacagcctttgcatttcatgtggagcta
aaaccaaagagtgcatttttcagagttggtgataggcaggagctgcaatgttcggtgaag
gattgtaatgaaaaggttactatgtcctgggctttgctgggggataagcccatgtttgct
aaaatacacacctcagggtcggaatccgtggcggcctttgaccctgtgatgacagtacat
gatgacattcttctctgcaaagtcagttgcggagcattgaccaaacaacagcgtgtggtt
gtcaaagtgtactcatttccagaggctcctgtcatatcaggctacgaccatcttctcttg
ggccagtccaacactctgacatgtgaggtgatagacgcttatcccgcggagcacctgcga
cttgagtggctgcgaggagacagcatgctccagacagatgtagagtccgttgtatctacc
tacaggttcatgcccaccccagaggacaaagaggcaagcatcacatgcagagcctctcac
gatcaggatggtgtgcctgatgaagagaagaccaaggaaaccactgtgtctctcacagtg
ctttatgcaccacagaatatatcaatatctgagccgactgctgtgagagttggctccagt
ctcacgttgtcgtgccatgctgaagggagccccagaccagatacacagtggaaggccatt
ggtccagatggacaggctgttattgtggggcagagcgaggagcttgttcttacagagatg
acactggtggattctggtcaatatgagtgtgtggtgagcaacaccattggaaacatcaca
gccagcgtgaacatccttgttcaagctcccccaaccaacaccaccatcacagtgagccca
gccagtgaggtgaaggaaggggagagcgtgacggtgtcctgcctgtcggacggagctccg
gtgggacgtatggtgctgaggagactctctgaggaccaggatgtagaactccagtccagc
aacggctcctccacctccttcaccctctcctctgccctgctagcagactctgctctctac
cagtgccaggccttcaacgaacacggcagtcagaaagtcagcgccttgctctctgttgaa
gagtatcccctggaggtggcgatggatgtgggggtgacggctgagatgggatccaacctg
gtgctctcctgccgggctttgggctgtccccagccagccttctactggaggagcatgctg
gacatgcccgtccatagccgtgcacacacccaggactccctctcccatctccacctgggc
ccacttgggctggtcaacgagcaagcctacacctgtgaggccaagtgtggctctgtcatc
aaggccaagcacgctgaggtcaaggtcttctctttcccctcggaccctatcatcgagaac
actggcccctttctggaacacggtgtcggcacctttttttgttcggtagccgacgtctac
ccagccagtctcctgcagatccagtggctcgatggggaaatcgagctagcctccgagatg
ggacagtattccagtgaactccagaatgtgacgtcaacgctttctttctcggttggaccg
gaggaccagggcagacagatcacctgcagagtcagtcttcagatggacgaaatccctcag
agtgggagagagaggcaggcggtgactgtactggagctccactatgcccccaggggaacc
accatcacagtgagcccagccagtgaggtgaaggaaggggagagcgtgacggtgtcctgc
ctgtcggacggagctcctgtgggacgtatggtgctgaggagactctctgaggaccaggat
gtagaactccagtccagcaacggctcctccacctccttcacccgctcctctgccctgcta
gcagactctgctctctaccagtgcgaggccttcaatgagcacggcagccagcgagctagc
acacacattacagtcaaagcacctcctaggaacacaacagttctgatatatccatctgct
gaggtgcaggaaggccaaaatgtcacaatctgctgtcgctctgtcagtttccccccacct
gctgtggttttaaggaaactggataatggcacagagctctactccccagatgggaacttc
ctgctggttaaccttgtgcccaatgatacaggcttataccaggtgaatgttaccaatgac
ctgggttacgagaccgagatcttcagcatcaacgtcatagagaagcactccagtacttca
ccagactggaaccacatagtcattcctgctgtctgtgtgggtatcatggtgaccaccacg
ggcctagtcctggactacctgaggagagccaggaggaagggcttctatgagctggccaag
tgtaagcccgggtctgcatag

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