KEGG   Salmo trutta (river trout): 115151785
Entry
115151785         CDS       T08542                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03020  RNA polymerase
stru03420  Nucleotide excision repair
stru04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115151785
  09124 Replication and repair
   03420 Nucleotide excision repair
    115151785
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115151785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115151785
   03400 DNA repair and recombination proteins [BR:stru03400]
    115151785
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115151785
  RNA polymerase III system
   RNA polymerase III
     115151785
  RNA polymerase I system
   RNA polymerase I
     115151785
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115151785
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 115151785
NCBI-ProteinID: XP_029551868
Ensembl: ENSSTUG00000010487
LinkDB
Position
17:18337965..18340995
AA seq 210 aa
MDDDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEELSELLLRYKLKESQLPRIQQGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgatgaggaaacatataggctatggaaaattcggaaaaccatcatgcagctg
tgtcatgacagaggctacctggtgacccaagatgagttggaccagaccttggatgagttt
aaaagtcagttcggggacaaacccagcgagggtcgcccacgacggacagatctcactgtc
ctggtagcacacaatgatgaccccacagaccagatgtttgttttctttcctgaggagcct
aaagttggtatcaagaccatcaagatgtactgccagcggatgcaggaggaaaacatcaca
cgtgcctgcattgtagttcagatgggaatgacaccttcagctaagcagtctctagttgat
atggcccccaaatacatcctggaacagtttctgcagcaggagcttctaatcaacatcact
gagcatgagctagttcctgaacacatagtcatgacaaaagaggaactgtctgaattgctg
ttacgatataaactgaaggagagccagctgcctaggatccaacaaggagatcctgtggcc
cggtactttggattgaaaagaggccaggtagtaaagataatcagacccagtgagactgct
ggacgatacatcacctacaggctggtccagtga

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