Salmo trutta (river trout): 115156315
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Entry
115156315 CDS
T08542
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00260
Glycine, serine and threonine metabolism
stru00270
Cysteine and methionine metabolism
stru01100
Metabolic pathways
stru01230
Biosynthesis of amino acids
Module
stru_M00035
Methionine degradation
stru_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115156315
00270 Cysteine and methionine metabolism
115156315
Enzymes [BR:
stru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
115156315
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
115156315
NCBI-ProteinID:
XP_029559648
Ensembl:
ENSSTUG00000013273
LinkDB
All DBs
Position
20:29249211..29282531
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AA seq
625 aa
AA seq
DB search
MSSVLSSTDSVGAVPSVCPNTAKLSNAQANGVAAILKGGSKVNGEAMLNVHKLSMNGSAQ
VNGDGAGRKAQNGSVHVNGHEGENDLEKTAAGVEERQWIRPDLPSKCTWKLGGSSVESPH
CRSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVVDAERDGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTAARFDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEG
IGYDFIPTVLDRSVIDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTLEDLMVSKPWWWNVSLQCLNLFSPLTV
LPSVNIKKTIKILKEKAFDQAPVVDESGVILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLSDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDMLNYITT
RERQGSTRERTLSECSMTSECSLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttctctccagcacagactctgtgggcgccgtgccctccgtctgccccaac
acagccaagctcagcaacgcacaggccaacggagtggctgccattttgaagggggggtcc
aaggtcaacggagaagccatgttgaacgtccacaagctctccatgaatggatcggctcaa
gtgaacggggacggtgctggccgtaaggcccagaatgggtcggtccatgtgaacgggcac
gagggggagaacgatctagagaagacagccgcaggcgtggaggagaggcagtggatccgt
cccgacttgcccagcaaatgcacttggaaactgggcgggtcttccgtagagtcccctcac
tgccgctctgaactgactgaagcccccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagcctttggccttaagtgtgaactc
ttggccaagtgtgagttctttaacgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggtggatgcagagagagatgggatcctcaaaccaggagacaccatcatcgagccc
acctctggcaacacaggtattggtctggccctggcctctgcagttaaaggctatcgctgc
atcatcgtcatgcctgagaagatgagcatggaaaaggtggatgtgcttagagccttgggg
gcggagatcgtgcgtaccccaaccgccgcccgctttgattcgccggaatcccacgtgggc
gtggcttggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaggagatcctggagcagtgcgat
ggtaaggtggacatgttggtggcaggagctggcacaggtggcaccatcactggtatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagaggagctgaacaaaacagataagacccagtacgaggtggagggc
attggatatgacttcatccctactgtactggacagatctgtaattgacaggtggtataag
tccaatgatgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggcacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgacaactggatgtgtgataagggcttcctaaccctagaagacctgatggtgtcc
aaaccctggtggtggaacgtgagtctgcagtgtctgaacctattttcccccctcactgtg
ctgccctccgtcaacatcaagaagaccatcaagatcctcaaggagaaggccttcgaccag
gcacccgtcgttgacgagtccggcgtgatcctagggatggttaccctgggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caattcaaacaggtgcgactgagcgataacttgggaaagctgtcccgtatcctggaaaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgaccgccattgacatgcttaattacatcaccacg
cgcgagaggcagggaagcacacgcgagcgcacgctgtcagagtgctcaatgacgtcagag
tgctcgctgaccgactag
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