Salmo trutta (river trout): 115158548
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Entry
115158548 CDS
T08542
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115158548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115158548
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115158548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
115158548
NCBI-ProteinID:
XP_029563496
Ensembl:
ENSSTUG00000013032
LinkDB
All DBs
Position
22:complement(29180228..29220684)
Genome browser
AA seq
2372 aa
AA seq
DB search
MASVLLQALERAEIAKLPKAVQNKLEKLFSDLQYEIDSFKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVAQTEQHHKLREEFTKIDEELKSVLEKNKEYEINQEKLTSEQAQLCKAKNEL
EAEKRELVRTLERRSQEVDYLSEDLQRLNDKVAEVNASKMGLQLKLDELESSEVNIKYRE
KHMEQEKELLRGQTAWLNEELKAKSEELLALSRQKGNQILELKCSLENKEDELNRVQDQV
TSLKTSNESLQKQAEDIINKLKEDKEQQASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAGEANKALEVRLQEMDDCQDKEAAELKERIISLEKELENANELL
SDTKLRGSAGAASVLSEETITTMSPTAVAVAKIVKPGMKLTELYTAYVETQEALQLERVE
NKRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSSKLEQAVKEVHRLQKVTDEA
NKRSSVLERDNQRSDVQLADMGQQIRVLLIELEEARGNHIAHDEEVSSADISSTSEVITQ
HLVTFRGVEELQQQNQRLLVALRELSDAQEREEEETTGTKCSELERSLEKAQTELEALRE
QRGHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAAAEEFSSTPRRSPAATPTTPTGI
ITMATESTEVVEAKAALRQLQEVFSSYKRERSESDKALMEQSEKLQEQVSDQRIQNAKIS
TQLEFTSKRYEMLQDNVKGYRKEIASLMEKGQKMAAAAQKSEQTVHTMTQDLRVAQEKLN
MAEGRAESLRKEREMLKLVESRLTQEKETMQTQQRVQNMLLTNLKTIEATLERSETDTRQ
RLNAQIEKQEREIGQLHKRLEHEVEQRHLLSRNQDLQLMDAKRQLETQTALLQKTRDQLS
AAQLEVSSLRLQQGSGEGGRLSLSSPPTPMGIRGLQVSEGDSEDLHGRLKQAETRAEELI
QQLRTATSSMELYRAMAQSLEESLDKEMQVTEQARSAIEERVKESQEQHRQLEKKLLEAE
KEKQGLQEEKMKALASVEQQVAELRRSLSSVQADHQEALQMAVVAAAQEQQAMLDSQEQA
KLASEAQDKYEREMMLHAADVEALQAAKAQALQAATLRQQLEERAQRASAQLLEARVSWE
EQERILKEEMSKVVSRSEELQRQNSLLHEQIQTMSCKMATTLQRQANESPLNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESLSAERERMQV
TAKTLAKHDELMKKTETMSVLMETNKMLREEKERMEHELQQTQAKVRKLESDIMPMQESN
AELSEKSGMLQAEKRILEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETGRLKAEVARSGGSVTSLQSQVQMLREGLGKVTSDRDALKRSVEAKNLDMQEKFRTI
TQVKKIGRRYKTQYEELKVEHDKMVLEAASTPAQEQEAQQASAQELQGLRDSLGQAETRT
KDLEGQLDNLNKVVGEREAEVRGSQEQASRLQTELTRLRQELQEKASQEDTLRQQMAEKE
EKTRKAFVGAKQRINQLMGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLREQQERHGEQRDEPPEQGPSKAQEQQRTTEQRGPLKTTPAADRGSASTSEPPTANIK
PTPLGAQGPSKPPAIPGNKSTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSE
GPPEHVTVYGSASGSVRSTSPNVQTTNPMLVVQQTQTQTTAFVQPTQQQSLSHTEPANQE
QSPAPVMEAAPSSQMERPSTSTAVFGTVSATPGTSSMSKRPREEEQDSSMVTDTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAEGSAEGLVPGESQEAPETSQQVVEEYPVLEE
AEEEGTASQSVPVELLLSETAFISFSYDANEEPPQHDVIVIVTDSESEDEQQEEVEDDEE
EEPDYDEEDEEEEDDEEEDEDDGGIGDEGEESNEGSGDGNEAYEGDDTEGPDGTDPGTET
EESLGASDSTQRPADSQTRSFEGSSSMEAFSSDPTSSAPRMHQSPRRAPHPLPPRLNITQ
ERGPPAQVQRPMRRQSVGRVPQLTPGMASGGVSHNIGQHFFDDDRMVPSTPTLVPPHRSD
SFAEAIHSPQVAGVPRFRFGTPEDLMPQTTSHSDLGHLASQGGLGMYDSPLFLPGHEDES
GGLSVPTTPLQVASPVSIFAEVPPSEGTAHASQSVPMVTTSTPGLVVAEGPSPGDERDDV
FMAPGGDLVEVSLEPVISRAGEIEEAAQVSDDCGLPSTSQELSSSSADTSKTQPKPSRPG
HSRQLQRWTENRMRRGTLPSRGVTGTGRRFAR
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgctacttcaagctttggagcgcgctgagatagcgaagctaccaaaagct
gttcaaaataaactagaaaagttattttctgatctgcaatatgaaatagattccttcaag
tcacaccaggagcaatttagagtcgacagcgaacaacagttctttgagaaagtgcaacgt
cttgaacagagtcaggaacagtttgtggcccagactgaacagcaccacaaactccgagag
gagttcaccaagatcgatgaagaactcaagagtgtactagaaaagaataaagagtatgaa
atcaaccaagagaagttgacatctgaacaggcccagctctgtaaagccaaaaatgaactg
gaggcagagaagcgggagcttgtgcgtacattggagaggagatcccaggaagtggactat
ctgagtgaggacctgcagcgcctcaatgacaaagtggcggaagtcaatgcctcaaagatg
gggctgcagctcaagttggacgagcttgaatcctcagaggtcaacatcaagtaccgtgag
aagcatatggagcaggaaaaggagctgttgcgaggccagacagcctggctgaacgaagag
ctcaaggctaaaagtgaggagctgctggctctttcacgccagaagggcaaccagatcctg
gagctgaagtgcagcttggagaacaaagaggatgagttgaacagagtccaggaccaagtg
accagtttgaagacttcaaatgaaagccttcagaagcaggctgaagacataatcaacaaa
ctgaaagaggataaggagcagcaggctagcatggaggagaagtttagaaacgagctgaat
gccaacataaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggaattgagtggggctgtagaggagctgcacaagctgctgaaagatgctggagaggcg
aacaaggccctggaggtgaggttgcaggagatggatgactgtcaggacaaggaggctgct
gagctgaaggagaggatcatcagtttggaaaaagaactggagaatgccaacgaactgctg
tccgacactaagctcagaggctctgccggtgcagcctcagtgctgtcagaggaaacgatt
accactatgtccccaaccgcagtcgccgtggccaagatagtcaaacctggcatgaagctg
acggagttgtacacagcgtatgtggagacccaggaggcactgcagctggagcgtgtggag
aacaagcgggtgaataagtacttggatgacatagtgcaggaggtggaggctaagggtccc
atcctcaaacgccagagggatgagcatgagcgcatgcagaaatctgtggccagcctttca
tccaagctggaacaggcagttaaggaggtgcaccgtttgcagaaggtgactgacgaggcc
aacaagcgctcttctgtcctggagagagacaaccagaggtctgatgtgcagcttgcagac
atggggcagcagatccgtgtcctactcattgagctggaggaggcgcgtggtaaccacata
gcccacgacgaggaggtgagctctgctgacatcagcagcacgtcggaggtcatcacgcag
cacctggtgacgttccgtggcgtggaggagctccagcagcagaaccagcgcctcctggtg
gccctccgagagctcagcgacgcacaggagagggaggaggaagagaccactggcaccaag
tgcagtgagctggagcgcagtctggagaaggcccagacagagctggaggctttgcgagag
cagcggggccaccagatgcagctggctgagtccatcgttaggcagagagacatgtaccga
gtgctgctggctcaggccaccggagtgagcttccctcagcaaggtgcagcagctgctgag
gagttctctagcaccccccgccgctccccagccgccacccccaccacacccactggaatc
attactatggcaacagagtcaaccgaggtggtagaggccaaggcagccctccgacagttg
caggaagtgttctcttcctataagagggagaggtctgagagtgacaaggccctgatggag
cagagtgagaagctacaggagcaggtgtctgaccagagaatccagaatgccaagatatcc
acccaactggagtttacctccaagaggtatgagatgcttcaggataatgtgaagggctac
aggaaggagattgcctctctgatggagaagggacagaagatggctgctgcagcccagaag
agtgagcagactgttcacaccatgacccaggacctgagggttgcccaggagaaactaaac
atggcagagggtcgtgctgagagcctcaggaaggagagggagatgctgaagctagtggag
tccagactgacccaggagaaggagaccatgcagacccaacaacgagtacagaacatgctg
ctcaccaacctcaagaccatagaggccacgttggagcgctccgagacagacaccaggcag
cgtctgaatgctcagatagagaagcaggagagggagataggccagctgcataagagactg
gagcacgaggtggagcaacgtcacctgctgagcagaaaccaagatttgcagctaatggat
gccaagaggcagctggagacccagacggccctgctccagaagaccagggatcagcttagt
gctgcccagctggaggtgagctctctcaggctgcagcagggcagtggagagggtggtcgt
ctgtccctgagctccccgcccactcccatgggcatcagaggtctccaggtttcagaaggg
gactctgaggatctgcatggccgcctgaagcaggcagagacacgggcagaggagctgata
cagcagctgaggacagccacctccagcatggagctgtacagagccatggcccagagccta
gaggagtccctggacaaggagatgcaggtgacagagcaggctcggtctgccatcgaggag
cgtgtgaaggaatcccaggagcagcaccgtcagttggagaaaaagctcctggaggcagag
aaggagaagcagggcctgcaggaggagaagatgaaagccctggcctctgtggagcagcag
gtggctgagctgaggaggagtctgagcagtgttcaggcggaccaccaggaggctctacag
atggcggtggtggcagcagcccaggaacagcaggccatgctggacagccaggagcaggcc
aagctggcgtcggaggcacaggataagtatgagcgtgagatgatgctccacgctgcagat
gtggaggccctccaggcagccaaggcccaggccctgcaggcagccacgctcagacagcag
ctggaggagagggcccagagagcctctgctcagctgctggaggccagagtctcctgggag
gaacaggagaggatcctcaaggaggagatgtctaaggtggtgtctcgttctgaagagctg
cagaggcagaacagcctcctccatgaacagattcagaccatgagctgcaagatggccacc
accctgcagcgccaggccaacgagagccctctgaacatctccctcacggaggaaggcaag
tctcaggaccaggtccttgagatactcaggtttgtgcgccgagagaaggagatagcggag
tctcgattcgaggtggcccaaggagagagtcttcgccataggctgagagtggagcacctg
gagagagagctgagagaactacaggagagccttagtgctgagagagagcgaatgcaggtg
acagctaagaccctggctaagcacgatgagctgatgaagaagactgagaccatgagtgtc
ttgatggagaccaacaagatgctgagggaggagaaggagaggatggagcatgagctccag
cagacacaggctaaagtgcgtaagctggagtcggacataatgcccatgcaggagtccaac
gctgaactgagtgagaagagtggcatgctgcaagcagagaagaggattctggaagaggac
atcaaacgctggaaggccagaacacagcacctggtgagccagcagaaggacacagaccca
gaggagtacaagcgtctccactctgagaaggaggctcacctcaaacgcatccagcagctc
actgaggagacgggcagactcaaggctgaggtggccaggagtggcggctcggtgacgtcc
ctgcagagccaggtgcagatgctgcgtgagggtctggggaaggtgacctctgacagggat
gctctgaagaggagtgtggaggccaagaacctggacatgcaggagaagttccgcaccatc
actcaggtcaagaagatcggacgccgctacaagacacagtatgaggagctcaaggtggag
cacgacaagatggtgttggaggcagcatccaccccagcccaggagcaggaggcccagcag
gcctcagcccaggagctccagggtctgagggactccctgggacaggctgagacccggacc
aaagacctggagggacagctggacaacctcaacaaggtggtaggtgagcgtgaggcggag
gtgcgcgggtcgcaggagcaggcctccaggctgcagacagagctgaccaggctgagacag
gagctgcaggagaaggcctcccaggaggacaccctcagacagcagatggctgagaaggag
gagaagaccaggaaggcctttgtcggggccaagcagaggatcaaccagcttatgggctct
aaggaccagctgcagaaggaaaatgaggagctgaagcagcagagggaggagctggaggtc
agagtcagtgctctgaagtcccagtacgagggccgtctgagccgccaggagagggagctg
cgggacctgagggagcagcaggagagacacggagagcagagggatgagcctcctgaacag
ggtcccagcaaggctcaggaacagcagaggaccacagagcagcgaggaccgctgaagacc
accccagctgcagaccggggcagtgccagtacctctgagccacctactgccaacatcaag
cccacccctctgggagcccaaggccccagcaagccccctgccatccccgggaacaagtcc
accccccgagcaagcatcaggcccatgatcacccccgccactgtgcccacccccacccct
actgccaccgtcatgcccaccacacaggtggagaaccaggaagccatgcagtcatccgag
ggcccgcctgagcatgtgactgtctacggcagtgccagcggttcagtacggtcaaccagc
cccaacgttcagaccaccaacccaatgctggtggtccagcagacccagacccagaccaca
gccttcgtccaaccaacacagcaacagagcctgtcccacactgaaccagccaatcaggag
cagtccccggccccagtcatggaagcggcacccagttcgcaaatggagaggccgtcgacg
tccacagctgtgtttgggacagtttcagccaccccaggaacatcctccatgtccaagaga
cctcgtgaggaggagcaggacagctctatggtgactgacacagacaccccccaggaggac
ccctctgaaccccccatccccaagaagctacgcatcatccagagagtcgacccagaggag
ccagaggcccaggaggaggtgctggctgagggcagtgcagagggactggtgcctggagag
agccaggaagccccagagaccagccagcaggtggtggaggagtacccagtactagaggag
gctgaagaggagggtacagcgtctcagtctgtccctgtagagctgctcctgtccgagact
gcattcatctcattttcatacgatgccaacgaagaacccccccagcacgatgtcatcgtc
atagtgaccgactctgagagcgaggacgagcagcaggaggaggtggaggatgatgaggaa
gaggaaccggactatgatgaagaggacgaggaggaggaggacgacgaggaggaggatgaa
gatgatggagggattggggatgaaggagaggagagcaatgaagggagcggagatggcaat
gaggcatatgaaggagacgacacagagggtcctgatgggacggacccaggcacggagacg
gaggagagtctaggagcatctgactctacccagcgccctgctgactcccagacacggagc
ttcgagggcagcagcagtatggaagccttctcaagtgacccaaccagctctgctcccaga
atgcaccagtctccacggagagcaccccacccgctgcccccccgcctcaacatcacccag
gaacggggaccccccgctcaggtacagcgccccatgcgtcgccagtcggtaggcagagtc
cctcagctcacccctgggatggccagcggcggagtaagtcacaatattggacagcacttc
tttgatgatgacaggatggttcccagtactcctactctggtgccgccacaccgctctgac
agctttgcagaagctatccattctccccaggtggctggtgtaccccggttcaggttcggc
accccagaggatctgatgccccagaccacctcccactctgacctgggacatctggcatca
caaggaggtcttgggatgtatgatagtcctctgttcctgcctggtcatgaggatgagtct
gggggcctcagcgttcccaccacacccctgcaggtggcttccccagtgtccatatttgca
gaggtcccgccatctgagggcacggcacacgcctctcagtctgttcccatggtaaccacc
tcaaccccaggcttggtggtggctgaaggaccaagtcctggggacgagagggatgatgtc
ttcatggcgcctgggggagaccttgtggaggtgtctctggaacctgtaatttctcgggcg
ggggagatagaggaagctgcccaggtctcagacgactgcggcctgccttctaccagccaa
gaactctcctccagctctgcagacactagtaagactcagcccaaaccctctagaccagga
cacagccggcagctccaacgctggacagagaaccgcatgaggagagggacgttgccatca
cggggtgtaactgggactgggaggagatttgcccgataa
DBGET
integrated database retrieval system
