Salmo trutta (river trout): 115159511
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Entry
115159511 CDS
T08542
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115159511
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115159511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115159511
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115159511
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
115159511
NCBI-ProteinID:
XP_029565155
Ensembl:
ENSSTUG00000025010
LinkDB
All DBs
Position
23:17837829..17873594
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AA seq
972 aa
AA seq
DB search
MRLFLLAVFLSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGREKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGNTTGRPIVPQCCYGFC
IDLLIKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVGASMT
PSLPSSSLETQDDRKSGRAEPPDPKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQ
LNLSDPSVSTVV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgttcctctcgtgctcctgtgcgcggggcggctgcgag
ccgaagatagtgaacatcggagcagtcctgagtcagaagaggtacgagcaagtctttaag
gatgcggtgacccaggcgaaccagatctacgggagagagaaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tctaaccaggtgtatgccatcctagtgagtcatcctccccagtccaatgaccacctcacc
cccacgcctgtgtcctacaccgcaggcttctaccgcatccctgtggtgggcctcaccaca
cgcatgtccatctactccgacaagagtatccacttgtcctttctgcggactgtccccccg
tactcccaccaggctcacgtgtggttcgacatgatgcgagagtttcgatggaaccacatc
atcctgattgtcagcgatgaccacgaggggcgggccgcgcagaagagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgctctgcttctggaagccaaagagctggaggctcgtgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcatcggcctccagctcatcaacggcaagaacgagtcggcccacatcaacgac
gcagtggcagtggtggctcagtccatccaggagctctttgagaaggaaaacatcacggag
ccgcccagaggctgtgtgggaaacaccaacatctggaagaccgggcccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgtgtggagttcaatgacgat
ggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcattcaa
gttgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctggccg
gggggagagacagagaaaccgcggggctttcagatgtccacaagactaaagatagtgacc
atacaccaggagccttttgtgtatgtgaagcccactgagcaggatggaacctgcaaggag
gaaaaaacattaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggtaacacaacaggacgtccaattgtacctcaatgttgttatggattctgt
atcgatctacttatcaagttggccggaaccatgaactttacctatgaggtgcacctggtg
gctgatgggaaatttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaat
ggcatgatgggagagctcctggggggtctggcagatatgatcgttgccccgctgacgata
aacaacgaacgagcccagtacatcgaattctccaaaccttttaagtaccaaggcctaacc
atcctcgttaaaaaggaaatccctcgcagtacactggactcgttcatgcagccgtttcag
agcacactgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttaccta
ctagaccggttcagcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccttgtcgtcagccatgtggttctcctggggagttttgcttaactccggtatt
ggggaaggcgcgccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggcttt
gccatgatcatagtggcatcgtatactgccaacctggctgccttcctggtgctggaccgg
cctgaggagcgcatcaccggcatcaacgacccgaggctgaggaacccatcagacaagttc
atctacgccactgtgaagcagagctctgtggacatctacttccggcggcaggtggagctt
agcaccatgtaccgccacatggagaagcacaactacgagagtgccgctgaggctatccag
gccgtgcgcgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaa
gcctcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggc
ataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttcc
catgagaatggcttcatggaagatctagataaaacctgggtgagataccaggagtgtgac
tcacggagcaatgccccagccacactcacctttgagaacatggcaggagtgttcatgctg
gtggctggaggcatagcagcagggatcttcctcatctttattgagatcgcctacaagcgg
cacaaagacgcccgcaggaagcagatgcagctggcctttgcggccgtcaacgtctggagg
aagaacctgcaggacagtaaggaggcctctgggagccaagctgtgggcgcatcgatgact
ccatcgttaccctcttcctctctagagactcaggatgataggaaaagtggtagagcagag
ccccccgaccccaaaaagaaagcctcttttaggtccatcagtacctccctggcctccagc
atcaagagacgtaggtcgtccaaagacacgcagtacccacccaccgacatcacgggccag
ctcaacttgtccgacccatctgtcagcacagtggtgtga
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