Salmo trutta (river trout): 115170121
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Entry
115170121 CDS
T08542
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115170121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115170121
04091 Lectins [BR:
stru04091
]
115170121
CD molecules [BR:
stru04090
]
Proteins
115170121
Lectins [BR:
stru04091
]
I-type lectins (Siglecs)
115170121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
HET-s_218-289
ICAM_N
C1-set
ICAM1_3_5_D2
C2-set
Ig_C17orf99
Ig_4
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
115170121
NCBI-ProteinID:
XP_029582289
Ensembl:
ENSSTUG00000005828
LinkDB
All DBs
Position
31:complement(35952266..35960963)
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AA seq
649 aa
AA seq
DB search
MTCININMGKGQTSMSQGFYKRRTTCNFSKQIMTAFALWMVLLPTAASKFVLNLTPKDPM
ARVGDSLVLTCKASGCAGDVMFTWASLTDRSLYGKTETNGTVSLQIFNPLAIQHINKVLC
KATCTNKGEKAQTSTKVNVYALPKDPTISRSDLLTEGQESNLTCTVPDVYPTERLIIEWL
LGDEVLLKQDEHLEVPTVTSVLKYRPTAQNNGQNVTCRATLDIGIDKRTRETVASMTVQY
SPRNITISENTQVNIGDSFTLTCRAEGNPEPTVLWRKLDQDGRSVVAGEGATLLVEEASW
SHGGEYECVAHNIVGNRTAHMTVNVQGPPEKPVIYRSPSGELKAGDSVTITCQSESGPQG
RVALRQLTGSQGAELQSNQGHTSITVQSLTATDSGLYECQATNPYGKQTSFLNFTVLDEL
YTENQRTTETITSMTVQYSPRNITISENTQVNIGDSFTLTCRAEGNPEPTVLWRKLDQDG
RSVVAGEGATLLVEEASWSHGGEYECVAHNVVGNRTAHMTVNVRAPPTNLSVEVFPSAEF
EKGQNVTIRSWAVGVPTPSATLVRLRDGVELHSSDGTFHLVHLGPEHAGLYLLNVTNVVG
HQSLDKSVNPKTVIIPAVCFVSMTAAAATLMRFLRRAKNTSSYELAMTV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtataaatatcaacatgggcaaaggacagacgtctatgtctcaaggtttctac
aagagaagaactacctgtaatttctcaaaacagataatgactgcgttcgcgctttggatg
gtattgctgcctactgcagcgtcgaaatttgtcctaaacctcacaccgaaagatcccatg
gctcgagtcggagacagtctggtcctgacgtgcaaagccagtggctgcgccggagacgtt
atgttcacctgggcttcattgactgaccggtcactctacggtaaaacggagaccaacggg
acagtgtccctacaaatatttaacccattggcaattcagcacatcaacaaggtcctctgt
aaggccacatgcacaaacaaaggagaaaaagcgcaaacgtctacaaaggtgaacgtctat
gccttaccaaaggatcccaccatatcaagaagtgaccttttgactgagggtcaggagagt
aacctcacctgcacagttccagatgtgtacccaactgaacgtctaatcattgagtggcta
ctgggagatgaagttctcctcaaacaagatgaacatctggaagtcccgactgtcacctca
gtgttgaaatacagaccgacagcccagaacaatggacagaatgttacctgcagagccacg
ctggacattgggattgacaagagaaccagagagactgtcgcatcaatgaccgttcaatat
tcccccagaaatatcactatctcagagaacactcaggtgaatatcggagacagttttaca
ctgacgtgtcgtgctgaggggaaccctgaacctacagtgttgtggagaaaactggaccaa
gatggccgctcagtcgtggcaggagagggtgcgaccctattggtggaagaagcgtcatgg
tcccacggtggagagtatgaatgcgtggcccacaacattgtaggaaaccgtacagctcac
atgactgttaatgttcaaggtcctccagagaagcctgttatttatcggagcccatctggt
gagctgaaagcgggggacagtgtgaccattacctgccaatcagagagtgggccgcagggg
cgtgtggcgttacgccagttgaccggcagtcagggggcggagctacagtccaaccagggc
cacacctccatcactgtccaatcgctgacagctacagactcgggactgtacgaatgtcag
gctaccaatccctatgggaaacagacatctttcttaaacttcacagtcttagatgagctt
tatacagagaaccagagaaccacagagactatcacatcaatgacagttcaatattccccc
agaaatatcactatctcagagaacactcaggtgaatatcggagacagttttacactgacg
tgtcgtgctgaggggaaccctgaacctacagtgttgtggagaaaactggaccaagatggc
cgctcagtcgtggcaggagagggtgcgaccctattggtggaagaagcatcatggtcccac
ggtggagagtatgaatgcgtggcccacaacgtcgtaggaaaccgtacagctcacatgact
gttaatgttcgagcgccgcccacaaacctgtccgtggaggtgttcccgtctgctgagttt
gagaaggggcagaacgtgaccatccggagctgggctgtaggcgttcccaccccctcggcc
accctggtgaggctgcgggacggggtggagctgcactcctctgacggaaccttccacctg
gtccacctgggcccggagcacgcagggctctacctgctcaatgtcaccaatgtagtggga
caccagagcctggataaatccgtcaatccaaagactgtcatcatacctgccgtgtgcttc
gtttccatgaccgctgctgcagcgactctgatgcgattcctgaggagagcaaaaaataca
agttcatatgaacttgcaatgacagtttag
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