Salmo trutta (river trout): 115177966
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Entry
115177966 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115177966
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115177966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115177966
04515 Cell adhesion molecules [BR:
stru04515
]
115177966
04090 CD molecules [BR:
stru04090
]
115177966
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115177966
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115177966
CD molecules [BR:
stru04090
]
Proteins
115177966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
ITGAX-like_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
Copine
Mid2
Motif
Other DBs
NCBI-GeneID:
115177966
NCBI-ProteinID:
XP_029594828
LinkDB
All DBs
Position
38:complement(13883620..13922428)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSRQGPLCLLTCMAAMAVSSMAFNIDEANTRIYKGEEQDFFGYKVLQFISGKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETDTIKYIGLSMAGQPTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLHITSNFTPAFQECTKKIVDLVFLFDGSGSMTVDEFDKNKGFIN
NIMTTLKNSSIKFAAVQFSTNTRTVFNFHDYQEGRALTKLSREVHMADLTNTHKAIDFVL
NNIFENQAAGATADATKVLVVITDGNPSDSDKRLSSIKRSDEKNIIRFIIGVKNVNLTKL
KSLASEPKENNTFLIEDYNGLKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
DKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWTVAQRLPGEQMGSYFGAELCSVDIDSDGNTDFLLVGAPM
FHQPPKEGRIYVYTLSDKLELRMEMNVSVLSQGRFGSSISSLTDLNGDGLNDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQLFGQSIDGKMDLGEDGLTDIVVGA
RGAVVVLRSRPVLSISAHLHFHPSEISTDNFDCLAKEIISPVVTLTACFNMAEATKSKAG
ALSAGMNVSYSLDVDPLRQRSRAFYSDMNKEARSLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLVFSQSESQQEGLTAILNTDSPTQAVVEVPFEKNCKENETCVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSIPVYRSKTTAVFTSKFHILNTYDWNDTMEMTVIGLSDNGNSTNSSLTRT
IPVQFAVDLVVKALPQDSTTYMNFTPEDTSPKRLVNVYEVQNLGFKSVPVTVTFTFPTKL
EHRFEMNYQISVLQNHTQCGKMINSTTEYCSPEKYCKSIKCESFLLDKFLTVTFVLSGNV
AFKDLDQHARSLSLPKKFTGDRETVNFISFVKLSYDKKRFVQTASDPRDNSSSFHQTQID
VQAEIIIPPHRDLIIGTGVGVGLFLLIIITMAMYMMGCFQRKSHDNEENEWEXSEQHDAA
KANNVYANALEKQPQPESRAKTSPC
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcagggacccctctgcctactcacctgcatggcagccatggctgtctcttca
atggctttcaacatcgatgaagcaaacacaagaatctacaaaggggaggaacaggatttc
tttggatacaaagtcctgcaattcatatctggcaaggagaaaggggtaatggtcagtgcg
ccatatcagaagaatggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgacacaatcaagtacattggactgtctatggct
ggacaacctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccacatcacc
tcgaacttcacacctgccttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcaggaagcatgacagtggatgaatttgataagaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagttcgcagcggttcagttctcaaca
aacaccagaacagttttcaactttcatgactaccaagaggggagagccttgacgaaactt
tcgagagaagtgcacatggctgatctaaccaacacacataaggcaatagactttgtcttg
aacaacatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtgctggtc
gtaataacagatggaaatcccagtgatagtgataaaaggttaagctctatcaaaagaagt
gatgagaaaaacatcatccgcttcatcatcggggtcaagaacgttaatttgacgaaacta
aagtccctggcatcagagccaaaagagaacaacactttcctcatcgaggactacaacgga
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaggagatgtctcagagtgggttcagtgctgtctacgtt
gataaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatattttacc
ggagcaccaagatctgaacacatgggacggatcctactttttaacaaggttaacaacaac
tggactgtggcacaaagattgcctggagaacagatgggctcctacttcggggcagagctg
tgttctgtggacatagactcagacggcaacacagacttcctactggtgggtgcaccaatg
tttcaccaacctccgaaagagggcaggatctacgtctacacactgagtgataagctggaa
ctgaggatggagatgaatgtttcagtgctgtctcagggtagattcggctcctccatctcg
tctctcacagacctgaatggagatgggctgaatgatgtagctgtgggcgctccacttgag
gatgatcacaggggggccgtgtacatctacctgggtgaaaagctaaagggtatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagctctttggccag
tcaattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagca
cgtggcgcagttgtcgtcttgaggtccagaccggtcctcagcatctctgctcatctccac
ttccatccctcggagatcagcactgataactttgactgtctggcaaaagagatcatttcc
cccgtggtcactttaacagcctgctttaacatggcagaggcaacaaagagtaaagcaggg
gcactgagtgcagggatgaacgtctcctactcgctggatgtggatccactgagacagagg
agccgagcattttacagcgacatgaacaaagaggccagaagtcttctctctacagtggag
ctgagaaaggagcggacttgcttcaatcactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaacttgttttttctcaatctgaaagccaacaagagggt
cttactgccattctgaatactgacagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaacatgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcctacaacaccagtctaactctcctctaccctcctggcctctcgttc
tccatgatgcatcttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtcagcataccggtctaccgtagtaaaactaca
gcagtgttcaccagtaaatttcatattttgaatacatacgactggaacgacacaatggaa
atgaccgtcatcggcctgagtgacaatggaaactcaaccaatagttcccttaccaggacc
atccctgttcaatttgcagttgacctggtagtaaaagcccttccccaagactccaccact
tacatgaactttactccggaggacacatcacctaaaagactggtgaatgtatatgaggtg
cagaacttgggatttaagtctgtacccgtcacagtcaccttcactttcccaactaagctt
gagcacagatttgaaatgaactaccaaatatctgtcttacagaaccatactcaatgtgga
aagatgatcaattcaacaacagagtattgctctccagaaaaatactgcaagtccatcaag
tgtgaaagtttccttttggataagtttttgacagttacatttgtgctgtctggaaatgta
gctttcaaggacctcgatcaacatgcaaggagcttgtcattgccaaagaaattcactggg
gatagagaaacagtcaatttcatcagttttgtcaaactcagctatgacaaaaaacgattt
gtccagacagcgagtgacccaagggataactcttcaagcttccaccaaacacagattgat
gttcaggctgagatcatcattcctccccatagagacctgataatagggacaggagttgga
gtaggactcttcctcctgatcatcatcacaatggccatgtatatgatgggatgcttccag
agaaaaagccatgataatgaagagaatgaatgggaatagagtgagcaacatgacgctgca
aaggctaacaatgtgtatgctaacgctttggagaagcagccacaacctgagagcagagcc
aaaacctctccttgttga
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integrated database retrieval system
