Salmo trutta (river trout): 115194302
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Entry
115194302 CDS
T08542
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115194302
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115194302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115194302
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Nectin family
115194302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_2
C2-set_2
TMEM154
Protocadherin
DUF5305
LST1
EphA2_TM
EzrA
Motif
Other DBs
NCBI-GeneID:
115194302
NCBI-ProteinID:
XP_029609781
Ensembl:
ENSSTUG00000043640
LinkDB
All DBs
Position
5:complement(47628300..47653441)
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AA seq
632 aa
AA seq
DB search
MTSHLGGLTPLLWILWSFIAVVQGDFVEPSPPYSLESLAEAETRLPCQFKVEVGQVVVQV
TWTKEKADGTKDQIITVHHTDGHTEFGQYSGRVRFSSRKPTVDSSLIIMNTVESDEGRYN
CHISTFPSGNFERQLSLTVWTTPISSLDPVILVEGQSFRLAASCRSVARPPPHLSWDTDL
TGQSHNRSLEGGSVSTHFSLHPLRSMDGKRLDCLVRHLTLKGPRRITNNLVVHYPPNAEI
SGFDQNWYAGLEEAALSCVSGGNPKPQSFNWTRKGGDLPEGVITGNGSLLFNRPLVLTDA
GIYQCVAMNSVGADNAEVEITVTELPQKQASFDSLLMIIVGGVAGVLLLVMIIIVISVTR
HHKRKNKKLSRELTVRKEEISTLSRQASFRKMNSVSMDTRGQTEENIPLRVEGTLRTSLS
SVGEQGRIRESRSTLVGGGGLDYLGRPVLYNSSRRGRESRAMDREEENRLRVESNEQNST
MSLANHLHPPLQPSPFPMEQSIELLRSLNGSAIIPTEWGLHIRQGPSSRNTHSPLSCNNP
PITDDEDEEEDEGVEGEWETCPRMSPLDQGRSEDEDSKTNSSQISEVECGLNPHFQQNNG
TLRPKPLPKYRPNGILLTSSPHASFIHKAQIV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcacctgggtggactgacaccactgctgtggatcctttggagtttcatcgct
gtggtgcagggggactttgtggagccctctcccccgtactccttagagtccctggctgag
gctgagacccggctgccctgccagttcaaggtggaagtgggccaggtggtggttcaggtc
acctggaccaaggagaaagcagatggcaccaaggaccagatcatcacagtacaccacacc
gacggacacacagagtttggtcagtactcggggcgtgtgcggttcagcagcaggaaaccc
acggtggactcatccctgatcatcatgaacactgtggagtcagatgagggcaggtacaac
tgtcacatcagcaccttcccctcggggaacttcgaacgacagctgtcactcaccgtgtgg
accacgcccatctcctccctggaccctgtgatccttgtcgaaggccagtccttccgattg
gctgcgtcctgtcgctctgtagcccgccctccgccccacctctcctgggacacagaccta
acaggccaatcacacaacaggagtttggagggtggttcagtctccacccacttttctctg
catcccctgaggagtatggatgggaagaggctggactgtctggtgaggcacctgactctg
aagggaccacgcaggatcaccaacaacctggtggtgcactatcctcccaatgcagagatc
tctgggtttgatcagaactggtatgctggtctggaggaagctgccctcagttgtgtcagt
ggaggaaaccccaaaccacagagtttcaattggaccagaaagggcggagacttaccagag
ggtgtgatcacagggaatggatccttgctgtttaataggcccctcgtcctgacggacgct
ggcatctaccaatgtgtggccatgaactctgtgggggcggataacgcagaggtggagatc
actgtgacagagttgcctcagaagcaggcgtcattcgacagtctcctgatgataatagtg
ggaggagtggccggagtactgcttctagtcatgatcatcatagtcatctctgtgacccgt
caccacaaacgcaagaacaagaaactgtcgagggaactcactgtgaggaaggaggagatc
agtactctctccagacaggcatctttcaggaaaatgaactcagtcagtatggacactaga
ggacagacagaggagaatatccctctcagagtggaggggacactgcggaccagtctgtcc
tctgtaggggagcaagggcgcattagggagagtcgatctactctggtagggggcgggggg
ctagactacctgggtcgacctgttctgtacaattcttcacgaagagggagggagagcaga
gccatggacagagaggaggagaacagacttagggtggagtcaaatgagcagaatagcacc
atgtctttggcaaaccatctccacccccctctccaaccctctcccttcccaatggaacag
tccatcgagctgctgaggtccctgaacggtagtgccatcatcccaacggagtggggttta
catatacggcaggggcccagtagcaggaacacccactctcctctcagttgcaacaaccct
cccatcacagacgacgaagacgaggaggaggatgaaggtgtggagggggagtgggagacg
tgccccaggatgagtccgttggatcaggggaggtcagaagacgaggacagcaagaccaac
agttctcagatctcagaagtagaatgtggactcaaccctcacttccagcagaacaatgga
acgttgagacccaaaccgctccccaaataccggcccaatggcatcctcctcacctcatca
ccacacgcctccttcatccacaaggcccagattgtatag
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