Salmo trutta (river trout): 115196684
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Entry
115196684 CDS
T08542
Name
(RefSeq) retinoic acid receptor alpha-like isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115196684
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115196684
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115196684
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115196684
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SRR1
Motif
Other DBs
NCBI-GeneID:
115196684
NCBI-ProteinID:
XP_029613379
Ensembl:
ENSSTUG00000013431
LinkDB
All DBs
Position
1:43932363..44106265
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AA seq
461 aa
AA seq
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MAGKGNPCHPPGGPGSAGGPTVSVGGFPMPHYSYFFPHMLGGLSPPTLSGLPVSGYSTPS
PATIETQSTSSEEIVPSPPSPPPPPRIYKPCFVCADKSSGYHYGVSACEGCKGFFRRSIQ
KNMVYTCHREKGCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKPECTEI
YVLSTETEQMIERVRKAHKETFPSLCQLGKYTTNNSAEHRVALDVNLWDKFSELSTKCII
KTVEFAKHLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQM
HNAGFGPLTDLVFAFAQTLLPLEMDDAETGLLSGICLLCGDRQDLEQADKVDLLQEPLLE
ALKIYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS
EGLEGQGASGGRSSGGGAPPGSCSPSLSPSSARSSPPAPSP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagggtaacccctgccaccccccgggggggccagggagtgcggggggcccc
actgtctctgtggggggattccccatgcctcactactcctacttcttcccccacatgctg
ggggggctgtcccctcccaccctctccgggctgcctgtcagcggatacagcaccccgtcg
ccagccaccatagagacccagagcaccagctcggaggagatagtccccagtcccccctcg
ccacctcctcccccgcgaatctacaaaccctgcttcgtttgtgcggacaagtcctcggga
taccactatggagtcagcgcctgcgagggctgcaagggtttcttccgtcgaagcatccag
aagaacatggtgtacacctgtcatcgcgagaagggctgcatcatcaacaaggtcacccgc
aaccgctgccagtactgccgcctgcagaagtgtttagaagtgggcatgtccaaggagtcg
gtgaggaacgacaggaacaagaagaagaaggaggagaagaagcccgagtgtactgagatc
tacgtgctgagtaccgagacggagcagatgatcgaacgcgttcgcaaggcccacaaggag
acttttccctcgctctgtcagctgggcaaatacaccacgaataacagtgcagagcaccgc
gtggctctagacgtaaacctgtgggataagttcagtgagctgtccactaagtgtatcatc
aagacagtggagtttgccaaacacctgccaggcttcaccaccctcactatcgctgaccag
atcaccctgctcaaggctgcctgtctggacatactgattctgaggatctgcacacgctac
actccagaccaggacaccatgaccttctcagacgggctgaccctgaacaggacccagatg
cacaacgcaggcttcggcccactcacagacctggtgttcgccttcgcccaaacactcctc
cctctggagatggacgacgcagagaccggcctgctcagcggcatctgtctgctgtgtgga
gaccgtcaggatctggagcaggcagacaaggtggacttgctacaggagcccctgctggag
gctctgaagatctacgtgaggaagaggaggcctcacaaaccgcacatgttccccaagatg
ctgatgaagatcacggacctcaggagcatcagcgccaagggagcggagagagtgatcact
ctgaagatggagatcccaggctccatgccccctctcatccaggagatgctggagaactca
gagggtctggagggccagggggccagcgggggccgctccagcggaggaggggccccacca
ggcagctgcagccccagcctgtcccccagttcagctcgcagcagcccccctgcaccctcc
ccttag
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