Salmo trutta (river trout): 115200801
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Entry
115200801 CDS
T08542
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115200801
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115200801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115200801
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115200801
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
115200801
NCBI-ProteinID:
XP_029619791
Ensembl:
ENSSTUG00000045795
LinkDB
All DBs
Position
10:15954591..16079491
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AA seq
1422 aa
AA seq
DB search
MAAPPGQPPSPRYPPLFLLLLFLSSPPPLLSRPLIPHPSINVAVVFCGSAYQNEVRGHLS
REDFADLPLEVNPVTVLVNDTNPRALLTRLCETMATEKLHGVVFEDDVGSGAGPQVAEVA
QILDFLSTQTALPIVGISGGSTVVIPHKAEGSTFLQMGASLEQQIVCMFKLMEEYDWGDF
VIITSMWPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSVRTSDVRAKRMLQQIDSQVLL
AYCSYEEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPPPISFPVGLIGVITDHWRKS
LRQRVREGVAIVAKGADSFRRHQGFLPEGHSDCNTPVTHINNNTLFRHMLNVTWERKDLS
FNSDGYLTNPSMAIVALDRDRLWDKVGTLERGILQVRYPVWPRYGSFLETVSDDRHLTVA
TLEERPFVIVENVDPDTGTCVRNTVPCRRQSNRTESIVGHSEPYTKLCCKGFCIDILKKL
SRTIKFSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEIIDFSVP
FVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRS
LVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTA
NLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHAHMVK
YNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQK
DSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVA
MGLSLLVFAWEHLLYWKLRKKLDKSPRMDFLLAISRGIYSCFNGVEEPDHPNLANSDLTA
NYAQANMLKMLRTAKDLVNSAQVETSLDHATKTIEHWGRHGGNLPVHIPQQVTTEMVPGG
FSHVTENTHTHLSPERPLSPQYCTLGVVTSLNRQKGLARPTPLRYTLPARTSSLYDRPLS
VSSLSRTHLDLAGGDHLSSYSQPSTGRLYAEPQHISHPRSPFIPYSELQLPDIYPFSHPP
SAISHPSHTEPSRKNRRSKSLLSGESGGGERRRRREEKTVCLAELRANHLQENNVSTQMP
DSLYPGTVLCPGVEGCVGSWPLPLEELVLAGRQKLHRRPSFLRATWGSERILQPDETPPT
SLDCQSHSALPDLFPCVMADQETPTKLYNPAPLRNNLCYPATSTRQHAYLHIRQDQRKGN
GRKKLRYSNSTHLPTYREAMLGGQGGGGGVGLGVVRRATNLLSRQYSHYLTSYPGLPLYH
GPLDLQAHSQASSNHASPSPGTYPSPSPVCQLLPCGGGFRGQRRSLYQDSLYGAYEANGT
YREDQDPGLEPQRGDASGGLRSEDRSCVTQPWGRVSSLESEV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctccaggacagccaccttctccgcgatatcctcctcttttcctcctcctc
ctcttcctctcctcccctcctcccctcctctcccgccctctcatccctcatccctctatt
aacgtggcagtggtgttctgtggctctgcttaccagaatgaggtcaggggtcatttgagc
agagaggacttcgctgatcttcccctagaggtgaacccggtcactgttctggttaacgac
accaaccctcgtgccctgctgacacgtctctgtgaaaccatggcgacagagaaactgcat
ggggtcgtgttcgaggacgatgtgggatcaggagctggacctcaggtggcagaagtggct
cagatcctagactttctgtcgactcagacagctctgcccatcgttggcatcagcggagga
tctaccgttgtcatacctcacaaggctgagggttccacatttctccagatgggtgcctcc
ctggagcagcagatcgtctgtatgttcaagttgatggaggagtatgactggggagacttt
gtaataatcaccagcatgtggccgggatacgagacgtttgtagactacgtccgatcctac
acggacacttcctacttcctgtggaggctacaagatatcctgtctctggagatgtctgtc
agaaccagtgacgtccgagccaaacgcatgttacagcagattgattcccaggtactcctg
gcctactgttcctatgaagaggcccagtacctgttccaggtagcaggggaggtgggtcta
ctggggcctgggtacatctggattctcccctccctcgcgttgggcaacacagagagccct
ccacctatcagcttccctgtaggactgattggcgtcatcactgaccactggaggaagagc
ctgaggcaacgtgtcagagagggagtggccatagtggccaaaggggcggatagtttcaga
aggcatcaagggttccttccagagggacacagcgactgcaacacaccagttacacatatc
aacaacaacacactgttcagacacatgctaaacgtgacatgggagcgtaaggacctgtcg
ttcaacagtgatggctacctgaccaacccctccatggccatcgtcgcactggacagagac
agactgtgggacaaggtgggtacattagagcggggtatcctccaggtgcgttacccggtg
tggcctcgctatggcagttttctggagacggtatcagatgatcgccacctgacggtagct
actctggaggagaggcccttcgtcatcgtagaaaacgtggaccccgacacgggcacctgt
gtacgcaacaccgtgccttgccgacgccagtccaaccgcaccgagagtattgtgggccac
tcggagccctacaccaagctgtgctgtaaggggttctgtatagacattctgaagaagctg
tctcgcaccattaagttctcctacgacctctacctggtcactaacgggaaacatggaaag
atgatcagtggcatctggaacggcatgatcggagaggtgttctataggaaagcagacatg
gccataggttctctcaccataaatgaggagcgttctgagatcatcgacttctccgtgccc
ttcgttgagacgggcatcagcgtcatggttgcccgtagcaatgggactgtctccccctcc
gccttccttgagccctatagcccagcggtgtgggtgatgatgtttgtaatgtgcctgacc
gtggtcgctgtgactgtattcgtgtttgagtacttcagtcctgtcgggtacaaccgaagc
ttggtcagtgccaaagcacctggaggtcctaccttcaccatagggaagtctgtgtggcta
ctgtggggcatcgtgttcaataactcagtccccattgagaaccctaaaggcacaaccagt
aagatcatggtgttggtgtgggccttcttcgctgtcatcttcctggcttcctacactgcc
aacctggctgccttcatgatccaggagcagtacatagacactgtgtctggactgtctgac
aagaagttccagaagcctcaggagcactaccctccattccgttttggtacggtccctaac
ggcagtacagagaggaacatcagaagtaactaccccgacatgcacgcacacatggtcaaa
tacaaccagaaaggagtggaggatgctctcaacagcctcaagacagggaagctggatgca
ttcatctatgatgctgcggtgttgaactacatggcagggaaggacgagggctgtaagctt
gtgactatcggctctgggaaagtgtttgccacgacaggctatggcatagccctgcagaag
gattccagatggaaacgacccattgacctggccttgctgcagttcctgggagacggtgac
acccagcgcttggagacggtctggctgtcaggcatctgtcagaatgagaagaacgaggtg
atgagtagtaagctggacatagataacatggccggggtcttctacatgctactggtggcc
atggggctcagtctcttggtgttcgcctgggaacatctactctactggaaactacgcaag
aaactagacaagtctcctcgcatggacttcctgctcgctatcagcaggggaatctacagt
tgcttcaacggggtggaggaaccagaccaccctaacctggcaaactcagacctaacagct
aactacgcccaggctaacatgcttaagatgctacgcaccgctaaagacctggtcaactct
gcccaggtcgagacctcactggaccacgccaccaagaccatagaacactggggtcgccat
ggcggcaacctgccagtccacattccgcagcaggtcaccacggaaatggttccaggaggg
ttttctcatgtcacagagaacacacacacacacctgtcccccgagcgcccccttagcccg
caatactgcacgctgggtgtagtgacttctctgaacaggcagaaggggttggcgagaccc
acgccgctacgatacacgctcccggctcgcacttcctccctctatgacagaccactttct
gtttctagtctcagtagaactcatcttgacctggctgggggggaccacctctcttcctac
tctcaaccctccacaggtaggctgtatgcggagccccagcacatctcccacccccgctct
cctttcatcccctatagtgagcttcagctgccagacatctaccccttctctcaccccccc
tctgccatctcccatccatcccacacagaaccctccaggaagaataggaggagcaagagc
ctcctctcaggggaatcaggaggaggagagaggaggcggcgcagggaggagaagacagtg
tgtctggctgaactccgggccaaccacctccaggagaacaacgtctcgacccagatgccc
gactccctgtacccaggaacggtgctctgtcctggggtagaaggctgcgttggctcctgg
cctcttcccctggaggagctggttctggcaggcagacagaagctccaccgacggccatct
ttcctccgagccacctgggggagtgagcggattctccagccagatgaaactccgcctaca
tcccttgattgccaatcacattctgctttaccagacctgttcccctgcgtcatggccgac
caagaaactcccactaaactctacaaccccgcccccctccggaacaacctatgttaccct
gccacctcaactcgccagcatgcgtatctccatataaggcaggaccagaggaaagggaac
ggacgtaagaagctgcggtactcaaactccacccacctgcccacctacagggaggccatg
ctggggggtcagggaggcggagggggggtaggccttggggtggtccggagagccaccaac
ctgctcagcagacagtactcccactatctaacctcctaccctgggctgcctctctaccat
ggccccctggacctccaggcccattcccaggcatccagcaaccacgccagccccagcccc
ggtacataccctagtcccagcccagtatgccagctcctgccctgtggaggtggctttcga
ggccagaggaggtcactgtaccaggacagtctgtatggagcctatgaggccaatggaacc
taccgagaggaccaggatccgggcttagagccccagagaggagatgcatcaggaggtttg
aggtctgaggacagatcctgtgtgacccagccctggggacgcgtgtctagtctggagtca
gaggtctga
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