Streptomyces tubbatahanensis: MMF93_25000
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Entry
MMF93_25000 CDS
T08938
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stub
Streptomyces tubbatahanensis
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stub03009
]
MMF93_25000 (rimO)
Enzymes [BR:
stub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MMF93_25000 (rimO)
Ribosome biogenesis [BR:
stub03009
]
Prokaryotic type
ribosomal protein modification factors
MMF93_25000 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UNS99351
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Position
5783694..5785322
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AA seq
542 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVQDATDADVAVVNTCGFVEAAKKDS
VDALLEAGDLKSAAREGEGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISER
LQTILGGGVHAPHLPRDRRKLLPVSPAERQGADVALPGHGAAGNAEAAASTPADLPAGLA
PASGPRAPLRRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPADVLSETRWLAE
QGVHEIMLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVL
TGTDKVAPYFDLSFQHSAPGVLRAMRRFGDTDRFLGLLEEIRKRAPEAGVRSNFIVGFPG
ESEQDLAELERFLTGARLDAIGVFGYSDEEGTEAAGYEAKLPEEEVARRLAHLSRLAEEL
TAQRAEERVGETVRVLVESVDEEEGPLGRGAHQAPETDGQVRLEPAGEGLDPESPAGQRL
QVGRMVEARVSAAEGVDLVAVELAGQGAAVSPARADAGRGAVPAARAAAGGGTRPVGEEA
GR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactctcggctgcgcacgtaacgaggtggac
tcggaggagctcgcaggccgcctggcggcggatggctgggatctcgtccaggacgccacc
gacgcggacgtcgccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtcgacgcgctgctggaggcaggcgacctcaagagcgccgcgcgcgagggagagggaaga
acgcaggccgtggtggccgtcggctgcatggccgagcggtacggcaaggagctggccgac
gccctgccggaggcggacggcgtcctcggcttcgacgactacgcggacatctccgagcgc
ctccagaccatcctcggcggcggcgtgcacgccccccacctgccgcgcgacaggcgcaag
ctgctgcccgtcagcccggccgagcggcagggcgccgacgtggcgctgcccgggcacggc
gcggccggtaacgcggaagccgccgcctccacccccgccgacctgcccgcgggcctcgcg
cccgcctccgggccgcgcgccccgctgcggcgcaggctgggcaccagccccgtcgcctcc
gtcaagctcgcctcgggatgcgaccggcgctgctcgttctgtgccatcccctccttccgc
ggctccttcatctcccgccgccccgccgacgtgctgtccgaaacccggtggctggccgag
cagggcgtgcacgagatcatgctggtctcggagaacaacacctcctacggcaaggacctg
ggtgacatcaggctgctggagacgctgctgcccgagctggcggccgtcgacggtatcgag
cgggtgcgggtcagctacctccagccggccgagatgcggcccggcctgatcgacgtcctc
accggcaccgacaaggtcgccccctacttcgacctgtccttccagcactcggcccccggc
gtgctgcgcgccatgcggcgcttcggggacaccgaccgcttcctggggctgctggaggag
atcaggaagcgggcacccgaggcaggggtccgctccaacttcatcgtcggcttccccggc
gagagcgagcaggacctggccgagctcgagcggttcctcaccggggcgcggctggacgcc
atcggtgtgttcggatactccgacgaggagggcaccgaggccgccggatacgaggccaag
ctgcccgaggaggaggtcgcccgccgtctggcgcacctttcgcggctcgccgaggagctg
accgcccagcgcgccgaggagcgtgtgggggagaccgtgcgggtactggtcgaaagcgtg
gatgaagaagagggccccctcgggcgtggcgcgcaccaggcgccggagacggacgggcag
gtgcgcctcgagccggccggcgagggcctcgacccggagtccccggcaggacagcggctt
caggtcggccgtatggtcgaggcgagagtgagcgcggccgagggcgtggacctggtcgcc
gtggagctcgcgggtcaaggcgccgccgtgtcgcccgcgcgggccgacgcgggccgaggt
gccgttccggctgcccgcgcggctgccggaggtggaacccgcccggtcggtgaggaggcc
ggcagatga
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