Streptomyces tubercidicus: STRTU_002905
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Entry
STRTU_002905 CDS
T09099
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00190
Oxidative phosphorylation
stud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
STRTU_002905
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STRTU_002905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stud03019
]
STRTU_002905
Enzymes [BR:
stud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
STRTU_002905
Messenger RNA biogenesis [BR:
stud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STRTU_002905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
WAU12543
LinkDB
All DBs
Position
complement(3393014..3395296)
Genome browser
AA seq
760 aa
AA seq
DB search
MNQQPSAQAQTQPEMPTPKPPQAPGPAAQPSVGSIAAHRPHAVRGTVPGLEPDLDADPDA
YEDEGVLGADGEELPSGRFLDRERSWLAFNERVLELAEDPATPLLERANFLAIFASNLDE
FFMVRVAGLKRRIATGVATRSASGLQPREVLDLIWTRSRELMARHAACFQQDIAPELADQ
GIHLIRWPELTEKEQARLFTLFRQQIFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVS
GHDHFARVKVPPLLSRFLEASPQRYVPIEDVIAAHLEELFPGMEVRAHHMFRVTRNEDLE
VEEDDAENLLQALEKELMRRRFGPPVRLEVEESIDPAVLDLLVQELKISDAEVYPLPGPL
DLTGLFGIGALDRPELKYPKFVAGTHRDLAEVESASAPDIFAALRARDVLLHHPYDSFST
SVQAFLEQAAADPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKARFDEQAN
IKWARKLEESGCHVVYGLVGLKTHCKLSLVVRQEGEMLRRYSHVGTGNYHPKTARLYEDL
GLLTADAQVGADLSDLFNRLSGYSRRETYRRLLVAPKSLRDGLVQRINKEIANQRAGRDA
YIRIKVNSMVDEAVIDALYRASQAGVPVDIWVRGICALRPGVTGLSETIRVRSILGRFLE
HSRIFVFGNGGEPEVWLGSADMMHRNLDRRIEALVRVADPAHRASLSRLLETGTSDSTSS
WHLGPDGDWTRQAVDADGAPLRNVQEMLIDARRRRRGPAT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcagcccagcgctcaggcacagacccagcccgagatgcccaccccgaagccc
ccgcaggccccgggccccgcggcccagccttcggtgggctcgatcgccgcgcaccgcccg
cacgcggtccgtggcacggtgcccggcctggagcccgatctggacgccgatcccgacgcg
tacgaggacgagggcgtgctgggcgcggacggcgaggagctgcccagcggccggttcctg
gaccgcgagcgcagctggctggccttcaacgagcgggtgctcgaactggccgaggacccg
gccacgcccctcctcgaacgggctaacttcctggcgattttcgccagcaacctggacgag
ttcttcatggtccgggtcgcgggactgaagcgacggatagccaccggcgtcgccacccgc
tccgcgtccgggctgcagccccgtgaggtactggacctcatctggacgcgctcacgcgaa
ctcatggcccggcacgccgcctgcttccagcaggacatcgcccccgagctcgctgaccag
ggcattcatctgatccgctggcccgagctgaccgagaaggagcaggcccgcctgttcacc
ctcttccgccagcagatcttcccggtgctcacgcccctggcggtggacccagcgcacccc
ttcccgtacatctccggcctctcgctgaatctggccgtcgtcgtacgcaacccggtcagc
ggccacgaccacttcgcgcgggtcaaggtgccgccgctgctctcccgcttcctggaagcc
tccccgcagcgctacgtccccatcgaggacgtcatcgccgctcacctggaggagctgttc
ccgggcatggaggtgcgcgcgcaccacatgttccgggtcacccgcaacgaggacctggag
gtcgaggaggacgacgcggagaacctcctccaggcgctggagaaggagctgatgcggcgg
cgcttcgggccgccggtccgcctggaggtcgaggagtccatcgacccggccgtgctcgac
ctgctcgtccaggaactgaagatctccgacgccgaggtctacccgctgcccggcccgctg
gacctgaccggcctcttcgggatcggcgccctggaccggccggagctgaagtaccccaag
ttcgtggccggcacccaccgtgacctcgccgaggtggagtccgcctccgcaccggacatc
ttcgccgccctgcgcgcccgcgacgtcctcctccaccacccgtacgactccttctccacc
tccgtccaggcgttcctggagcaggccgccgccgacccggacgtcctggccatcaagcag
acgctctaccgcacctccggcgactcaccgatcgtggacgccctgatagacgccgcggag
tccggcaagcaggtcctcgtcctcgtcgagatcaaggcccgcttcgacgagcaggccaac
atcaagtgggcgcggaagctggaggagtccggctgccatgtcgtctacggcctggtcggc
ctcaagacgcactgcaagctctcgctcgtggtccgccaggaaggcgagatgctgcgccgc
tactcccatgtggggaccggcaactatcaccccaagacggcccggctctacgaggacctc
gggctgctgaccgccgacgcccaggtcggcgccgacctctccgacctcttcaaccggctc
tccggctactcccgccgcgagacctaccgccgcctcctggtcgcccccaagtccctgcgg
gacggcctggtccagcggatcaacaaggagatcgcgaaccagcgcgcgggccgtgacgcg
tacatccgcatcaaggtcaactccatggtcgacgaggccgtcatcgacgcgctctaccgc
gcctcccaggccggtgtgccggtcgacatctgggtccgcggcatctgcgcgctccggccg
ggcgtcaccggcctgagcgagaccatccgggtccgcagcatcctcggccgcttcctcgaa
cactcccggatcttcgtcttcggcaacggcggggagcccgaggtgtggctgggcagcgcc
gacatgatgcaccggaatctggaccgccggatagaggcgctggtgcgggtcgccgacccg
gcgcaccgcgcctccctcagccggctgctggagacggggacgtcggattccacctcgtcc
tggcatctcggcccggacggggactggacccggcaggcggtggacgcggacggcgcgccg
ctgcgcaacgtacaggaaatgctcattgacgcccggaggcgccggcgtggcccagcgaca
tga
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