Streptomyces tubercidicus: STRTU_003855
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Entry
STRTU_003855 CDS
T09099
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STRTU_003855 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stud01007
]
STRTU_003855 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stud03016
]
STRTU_003855 (lysS)
Enzymes [BR:
stud01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
STRTU_003855 (lysS)
Amino acid related enzymes [BR:
stud01007
]
Aminoacyl-tRNA synthetase
Class I (A)
STRTU_003855 (lysS)
Transfer RNA biogenesis [BR:
stud03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
STRTU_003855 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
WAU13366
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All DBs
Position
4431567..4433291
Genome browser
AA seq
574 aa
AA seq
DB search
MAQQSTETDWVSRFADEVIAEAERRAPGKPVVCASGLSPSGPIHLGNLREVMTPHLVADE
IRRRGYEVRHLISWDDYDRYRKVPAGVAGVDESWAEHIGKPLTSVPAPAGSPYPNWAEHF
KAAMSDALAELGVEYDGISQTEQYTSGVYREQILHAMKHRADIDAILAQYRTKKAPAKKS
QKPVDEAELEAAEGSGAAGEDDGSGGSAGYFPYKPYCGQCAKDLTTVTSYDDETTELVYT
CSECGFGETVRLSEFNRGKLVWKVDWPMRWAYEGVIFEPSGVDHSSPGSSFVVGGQIVRK
IFGGDQPIGPMYAFVGISGMAKMSSSRGGVPTPGDALKIMEAPLLRWLYARRRPNQSFKI
AFDQEIQRLYDEWDKLEAKVADGSVLPADAAAYSRAARTAAGELPRTPRPLPYRTLASVA
DITAGHDEQTLRILGELDPDNPVTSLDETRPRLAKAEYWISTQVPAEQRTIVRDEPDAEL
LGTLDEQARGSLRLLLDGLDEHWSLDGLTTLVYGVPKVQAGLEPDAKPTPELKTAQRAFF
ALLYNLLVGRDTGPRLPTLLLAVGADRVRKLLGE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtggctcagcagagcaccgagaccgactgggtctccaggttcgcggacgaggtcattgcc
gaggcggagcgccgcgccccgggcaaaccagtcgtctgcgcctcgggcctgagtccgtcc
ggcccgatccacctcggcaacctccgcgaggtcatgaccccgcacctggtcgccgacgag
atccgccgccgcggctacgaggtccgccacctcatctcgtgggacgactacgaccgctac
cgcaaggtcccggccggtgtcgcgggcgtcgacgagtcctgggccgagcacatcggcaag
ccgctgacctccgtacctgccccggccggctcgccgtacccgaactgggccgagcacttc
aaggccgcgatgagcgacgcgctcgccgagctgggcgtcgagtacgacggcatcagccag
accgagcagtacacctccggtgtctaccgcgagcagattctgcacgcgatgaagcaccgt
gcggacatcgacgcgatcctcgcccagtaccgcacgaagaaggccccggcgaagaagtcg
cagaagccggtcgacgaggccgagctggaggccgccgagggctccggtgcggccggggag
gacgacggcagcggcggctcggcgggctacttcccgtacaagccctactgcgggcagtgc
gcgaaggacctcaccacggtcacctcgtacgacgacgagaccaccgagctggtctacacc
tgctcggagtgcggcttcggcgagacggtccggctgagcgagttcaaccgcggcaagctg
gtctggaaggtcgactggccgatgcggtgggcctacgagggtgtgatcttcgagccgtcc
ggtgtcgaccactcctcgcccggttcgtcgttcgtcgtcggcggccagatcgtccgcaag
atcttcggcggcgaccagccgatcggcccgatgtacgcgttcgtgggcatcagcgggatg
gccaagatgtcctcgtcgcgcggcggggtgccgaccccgggcgacgcgctgaagatcatg
gaggcgccgctgctgcgctggctgtacgcgcgccgccggcccaaccagtccttcaagatc
gccttcgaccaggagatccagcggctctacgacgagtgggacaagctggaggccaaggtc
gcggacggcagtgtgctcccggccgacgccgccgcgtactcccgcgcggcccgcaccgcc
gccggcgagctgccccgtacgccgcgcccgctgccgtaccgcaccctcgcctcggtcgcg
gacatcacggccggccatgacgagcagacgctccggatcctcggcgaactggacccggac
aaccccgtcacgtccctggacgagacccggccgcggctcgccaaggccgagtactggatc
agcacccaggtcccggccgagcagcgcaccatcgtccgcgacgagcccgacgcggagctg
ctcggcaccctcgacgagcaggcgcgcggctcgctgcggctgctgctcgacggcctcgac
gagcactggtcgctggacggtctgaccaccctggtctacggcgtgccgaaggtgcaggcg
ggtctggagccggacgccaagccgactccggagctgaagaccgcccagcgcgcgttcttc
gccctgctgtacaacctgctggtgggccgggacacggggccgcggctgcccacgctgctg
ctggctgtcggcgccgaccgggtgcggaagctgctcggggagtga
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