Streptococcus uberis: SUB1716
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Entry
SUB1716 CDS
T00849
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sub
Streptococcus uberis
Pathway
sub03030
DNA replication
sub03410
Base excision repair
sub03420
Nucleotide excision repair
sub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUB1716 (polA)
03410 Base excision repair
SUB1716 (polA)
03420 Nucleotide excision repair
SUB1716 (polA)
03440 Homologous recombination
SUB1716 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sub03032
]
SUB1716 (polA)
03400 DNA repair and recombination proteins [BR:
sub03400
]
SUB1716 (polA)
Enzymes [BR:
sub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUB1716 (polA)
DNA replication proteins [BR:
sub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SUB1716 (polA)
DNA repair and recombination proteins [BR:
sub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SUB1716 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SUB1716 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAR43640
UniProt:
B9DW03
LinkDB
All DBs
Position
complement(1692950..1695595)
Genome browser
AA seq
881 aa
AA seq
DB search
MENKNRLLLIDGSSVAFRAFFALYQQIDRFRNQAGLHTNAIYGFHLMLDHMMKRVQPTHI
LVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPYIREMLKALGVPYYDLVNYEADDII
GTLDKIAERTEVPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEFEEFTPDYLMEKMGIT
PEQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLQEYGSLEGIYANVDSFKPSKMKENLIN
DKAQAFLSKTLATIDTNAPITIGLEDLVYHGPNHEALASFYDEMGFVQLRAALSNQLPKE
PEEEIVYHEVVDDISPDMFTDDTFIYFELLNDNYHREDITTFAWGNTENIYVSQNPEVLK
TDVFQAFLRKPMATYDFKRAKILLSHLNIDVPRGAFDARLANYLLSNVDDNQLSTIARVH
TNIHLESDDVVYGKGVKRAFPDKGLLFAHLAKKIKVLVESKATMLDKLSDHDQLALFEDI
EMPLANVLAKMEITGIKVNKETLVEMAEQNKVIIDRLTQEIYDLAGEEFNINSPKQLGSI
LFEKMQLPIEMTKKTKTGYSTAVDVLERLAPIAPVVAKILDYRQITKLQSTYLIGLQDYI
MEDGKIHTRYVQDLTQTGRLSSIDPNLQNIPIRMEQGRLIRKAFTASSEDALLLSSDYSQ
IELRVLAHISGDQHLITAFNEDADIHTSTAMRVFAIDKEEDVTANDRRNAKAVNFGIVYG
ISDFGLSNNLGISRQKAKEYINTYFDRYPGIKDYMDSIVREAKDKGYVETLFKRRRELPD
INSRNFNVRSFAERTAINSPIQGSAADILKIAMINLDKALEEGRFKTKMLLQVHDEIVLE
VPKDELEKVKQLVKETMEHAVDLSVPLRADENSGKSWYEAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagaatagattattattaattgatggctcatctgtagcctttcgtgccttt
tttgctttataccaacagattgatcgttttagaaaccaagctggcttacataccaatgct
atttatggtttccatttaatgctcgatcatatgatgaagcgcgtgcagccaacacatatc
ctggtggcttttgatgcgggaaaaacaaccttccgtacagaaatgtacgcggattataaa
gggggacgtgccaaaactcctgatgaattccgtgaacagtttccatacatcagagaaatg
ctaaaagctctaggtgtgccatattacgatttggtgaactacgaagccgacgatattatt
ggtactttggataaaatagcagagcggacagaagtgccatttgatgtgacaatagtcagt
ggtgataaggatttaattcaattaactgacgctaacacagttgttgaaatctccaaaaaa
ggagttgccgaatttgaagaattcactccggactatctgatggaaaagatgggcattacc
ccagaacaattcattgatttgaaagccctaatgggtgacaaatcagataatattccaggt
gttactaaaattggtgagaagactggcttaaaactcttacaggaatatggcagtttagaa
ggcatttatgcaaacgttgattctttcaagccttctaagatgaaagagaatttaatcaat
gataaagcgcaagcctttttatcaaaaaccttggcaactattgataccaatgctcctatc
acaattggtttagaagacttggtctatcacggtccaaatcatgaggcacttgcctccttt
tatgatgagatgggctttgtgcaattgcgtgcagctttatcgaatcaattgccgaaagag
ccagaagaagagattgtctaccatgaagtggtcgatgacatcagtccagacatgttcacc
gatgatactttcatttattttgaactcttaaatgacaattaccaccgtgaagacattaca
acttttgcttggggaaatactgaaaacatttatgtctctcaaaatcctgaagtcttgaaa
acagatgtctttcaggcctttttgagaaagccgatggcaacctatgattttaaaagagct
aagatcttattgagtcatttaaacattgatgtgccaagaggagctttcgatgcccgtttg
gccaattaccttttgtcaaatgttgatgataatcagttgtcaaccatagcaagggtgcat
accaatatccatttggaatcagatgatgtggtatacggaaaaggggtgaaacgtgctttt
ccagacaaaggcctcctttttgctcatttagccaaaaaaatcaaagttttggttgaaagc
aaagcgactatgctagacaagttgtctgaccatgatcaactggcactttttgaagacatt
gagatgcccttagcaaatgttctcgcaaagatggagatcactggtattaaggtcaataaa
gaaaccttagttgaaatggctgagcaaaataaggtgattattgataggctgacgcaagaa
atttatgacttggctggtgaagaattcaacattaattctccaaagcaattaggatcgatt
ttatttgaaaagatgcaattgcctatagaaatgacaaagaaaactaagacaggttattcc
actgctgttgatgtcttagaacgtctagccccaattgcaccagtcgttgccaaaatatta
gactaccgtcaaattacaaaattgcagtctacctatttgattggtcttcaagattatatt
atggaagatgggaaaatccataccagatatgttcaggatttaacccaaacaggtcgactc
tcaagtattgatcccaaccttcaaaatatccctatccgaatggaacaggggcgcttgatc
cgtaaggcttttacggcatcgtcagaagatgctcttttgttgagttcggattattctcaa
atcgaattacgtgtcttagctcatatttcaggagatcaacatttgattactgcctttaat
gaagatgcggatattcacacatccacagctatgcgtgtctttgctattgacaaggaagaa
gatgtgactgctaacgaccgtcgtaatgcaaaggcagtaaactttggaattgtctatggt
atttctgattttggcttatctaacaatttaggcatcagtcgtcaaaaagcaaaagaatac
attaatacttattttgaccgatatccaggaatcaaagattatatggattctattgttcgg
gaagctaaagataaaggctatgtggaaacactctttaaacgtcgtcgtgaactaccagat
attaattcacgcaattttaatgtgagatcttttgcagaacggacagctattaattcgcct
attcagggtagtgctgccgatattctcaaaattgccatgattaatttagataaggcctta
gaagaggggcgcttcaaaacaaaaatgctcttgcaggtacatgatgaaattgttttagaa
gtgccaaaagatgaactcgagaaggtcaaacaactggtcaaagaaactatggagcatgct
gttgatttatcagttcctttaagggcagatgaaaattcaggtaagagttggtacgaggct
aagtag
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