Sulfolobus sp. E5-1-F: GFS03_10480
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Entry
GFS03_10480 CDS
T06918
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
sule
Sulfolobus sp. E5-1-F
Pathway
sule03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFS03_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sule03021
]
GFS03_10480
Enzymes [BR:
sule01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFS03_10480
Transcription machinery [BR:
sule03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GFS03_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
AbiEi_4
Filamin
DUF4817
Motif
Other DBs
NCBI-ProteinID:
QGA54971
UniProt:
A0A5Q0SKQ4
LinkDB
All DBs
Position
2004465..2007860
Genome browser
AA seq
1131 aa
AA seq
DB search
MNELASILSVDERWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEIPTEIPGLK
VRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPLWLTMIPVENNIEAEPEEVYIG
DLPIMLKSAIDPISQYTLDKLIEIGEDPKDPGGYFIVNGSERVIVTQEDLAPNRVLVDTG
KTGSNITHTAKIISSTAGYRVPVTIERLKEGTYHVSFPAVPGKIPFVILMRALGILTDRD
IVYAVSLDPQIQNELFPSLEQASSIATVDDALDFIGSRVAIGQKRENRIEKAQQIIDKYF
LPHLGTSADDRRKKAYYLAYAISKVIELHLGRREPDDKDHYANKRLRLAGDLFASLFRVA
FKAFVKDLTYQLEKSKVRGRKLTLKALVRPDIVTERIRHALATGNWVGGRTGVSQLLDRT
NWLSMLSHLRRVISSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLALMAQIA
VGINEKIVEKTLYEMGVVPVEEVIRRVTEGGEDQNEYLKWSKVLLNGRLIGYYQDGQELA
NKIRERRRKGEISDEVNVAHIVTDFINEVHVNCDSGRVRRPLIVVSNGNPLVTREDIEKL
ESGTITFDDLVRQGKIEYLDAEEEENVYVALEPSDLTPEHTHLEIWSPAILGITASIIPY
PEHNQSPRNTYQSAMAKQALGLYAANYQLRTDTRAHLLHYPQRPLVQTRALDIIGYTNRP
AGNNAILAVMSFTGYNMEDSIIMNRSSVERGMYRSTFFRLYSTEEVKYPGGQEDKIVVPE
PGVRGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDTSI
VTRHGEMGIVDLVLVTETAEGNKLVKVRVRDLRIPSIGDKFASRHGQKGVIGMLIPQVDM
PYTVKGVVPDIILNPHALPSRMTLGQIMEGIAGKYAALSGNIVDATPFYKTPIEQLQNEI
MKYGYLPDATEVTYDGRTGQKIKSRIYFGVVYYQKLHHMVADKIHARARGPVQILTRQPT
EGRAREGGLRFGEMERDCLIGFGTAMLLKDRLLDNSDRTTIYVCDQCGYIGWYDKNKNKY
VCPIHGDKSNLFPVTVSYAFKLLIQELMSMIISPRLILEDRVRLSGGKENE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaattggcatctattttaagcgttgatgaaagatggaaagttatcgaagcttat
tttaaatctaaaggcttagttagacagcatctggattcatacaatgactttgttagaaac
aagcttcaagagatcattgacgagcaaggagaaatcccaacagaaataccaggtttgaaa
gtgagattaggcaagataagaataggaaaaccaagagttagggaatcagataggggagaa
agggagatcagtccaatggaagctagactaaggaacttgacctatgctgctccactatgg
cttacaatgattccagttgaaaataatattgaagcagaaccagaggaggtttatatagga
gatttacctataatgctcaaatcagcaatagatccgatatcacagtatactttagataag
ctgattgagattggtgaggatcctaaagacccgggagggtatttcatagtaaatgggtcc
gaaagagttatagtaactcaagaagatttagctccaaatagagttcttgtagatactgga
aagacggggtcaaatattacacatacggctaaaattatctctagtactgcaggctataga
gtgcccgttacaatagaaagactaaaagagggtacatatcatgtatcatttccagcagtt
ccaggtaaaattccgtttgttattttaatgagagcacttggtatattaactgacagggac
atagtatatgcagtatcattagatcctcagattcagaacgaattatttccctctttagaa
caagcaagttctatagctactgttgatgatgcactagattttataggtagcagagtagcc
ataggccaaaagagagaaaatagaatagaaaaagcacaacaaataattgataaatacttt
ctgcctcatttaggaacttcggcagatgatagaagaaagaaagcatattatttagcttat
gctatatcaaaagttattgagctgcatctgggtagaagagaacctgatgataaagatcat
tacgctaataaaagattaagattagccggagacttattcgcgtcattatttagagtagct
ttcaaggctttcgtaaaagatttaacatatcaactagaaaaatccaaggtaagaggtaga
aagctcactttaaaggcattagttaggccagatatcgtaacagaaagaataaggcatgca
ttagctactggtaattgggttggtggaagaactggagttagtcaattacttgatagaact
aactggctgtctatgttaagccatctgaggagagtaatatcctcattagcaaggggtcaa
cctaatttcgaagcgagagatttacatggtacacaatggggtaggatgtgtccctttgaa
acacctgaaggtccgaatagtggattagttaagaatttagcgttaatggctcaaattgct
gtaggaataaatgagaagattgttgaaaaaactctttatgagatgggagtagttccggtg
gaggaggttataagaagagtaactgaaggtggagaggatcagaacgaatatctaaaatgg
tctaaagttttacttaacggaagattaataggctattaccaagatggacaagaattagct
aacaagatcagagaaagaaggagaaaaggagaaattagtgatgaagtaaatgtagctcat
atagttacagatttcattaatgaagttcatgttaattgcgattctggaagagttagaaga
ccacttatagttgtttctaacggtaacccgttggtaactagagaagatattgaaaagtta
gaatctggcactattacctttgacgatctcgttagacaaggaaagatagagtatctggat
gcagaagaagaagagaacgtttatgttgctttagaacctagtgacttaactccagagcat
actcatttagagatatggtctccagctattttgggcataacagcttctataataccttat
ccagagcataatcaatcgcctagaaatacatatcagtcagctatggctaaacaagcttta
ggtttatatgcagcgaactatcagttacgtacagatacgagagcccatttactccattac
ccacagagacctttagttcaaactagggcattagatattataggctatacaaataggcca
gccggaaataacgctatcctagctgtaatgtcatttactggatacaatatggaagattca
ataattatgaataggtcctccgttgagagaggaatgtataggtctacattctttagactt
tactcaacagaagaggtaaaatatcctggaggtcaagaagacaaaatagtagttccagag
cctggtgttagaggatacaaaggcaaagaatactatagacttctagaggataacggagtg
gtctcacccgaggtcgaagtgaaaggaggagacgtattgataggtaaagttagccctcca
agattcttacaagaatttaaagaattatctccagaacaagctaagcgtgatacctcaata
gttactagacatggtgaaatgggtatcgtagatctagttttagttactgaaactgcagaa
ggcaataagctagttaaggtaagagtaagagatcttagaataccttctataggtgataaa
ttcgctagtagacatggacaaaaaggtgtaattggtatgcttataccacaagttgatatg
ccatatactgttaaaggtgtagtgcctgatataatattaaatcctcacgcattgccatct
agaatgacattaggtcaaattatggaaggaatagcgggtaaatatgctgcactatctggg
aatattgtagatgctacacctttctacaagacacctatagaacaattacaaaatgagatc
atgaaatatggttatctaccagacgctaccgaagtaacatatgatggccgtactgggcag
aaaattaaatctagaatatattttggagtagtatattatcagaaattgcatcatatggta
gcagataagattcacgccagagctaggggcccagttcagattttaacaagacagccaact
gaaggaagagcaagagaaggtggtttaagatttggagaaatggaaagagactgtttgatc
ggttttggcactgcaatgctccttaaggataggttattagataactctgatagaacaaca
atttacgtttgcgatcagtgcggttatataggttggtatgataagaataagaataaatac
gtatgcccaatacatggtgataagagtaacttgttcccggttactgtatcttatgcattt
aagcttttaattcaagaactaatgagcatgatcatatcacccagattaattttagaggat
agggttagattgagtggaggtaaagaaaatgagtga
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