Sulfuriferula sp. AH1: CAP31_08405
Help
Entry
CAP31_08405 CDS
T04857
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sulf03009
]
CAP31_08405
Enzymes [BR:
sulf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CAP31_08405
Ribosome biogenesis [BR:
sulf03009
]
Prokaryotic type
ribosomal protein modification factors
CAP31_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ARU31702
UniProt:
A0A1Y0G7F7
LinkDB
All DBs
Position
complement(1649429..1650742)
Genome browser
AA seq
437 aa
AA seq
DB search
MNMIPKVGFVSLGCPKATSDSERILTELRAEGYLIAPNYQDADLVVVNTCGFIDAAVEES
LDAIGEALAENGKVIVTGCLGAKSNVVQQAHPSVLAVTGPHATAEVMAAVHAHLPKPHDP
YLDLVPPQGIRLTPDHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVGEVMQEAERLAEA
GVKELLVISQDTSAYGVDIKYRTGFWQGRPLKTRMTELAAALSELDVWVRLHYVYPYPHV
DEVVPMMAEGKILPYLDIPFQHASPRILKAMKRPAAAENTLARIRAWREICPELVIRSTF
ITGFPGETEADFEQLMDFIDAAELDRVGCFTYSAVEGASANALPDQVPEEIKEERRARLM
ERQADISADRLAARIGQTLTVLIDEISEEGAIGRSYADAPEIDGVVIIEEAAGLVPGEFA
TVKIIDSGEHDLWGEAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgattccaaaagtaggctttgtttcattgggttgtccaaaggcaacttcagac
tccgaacgtattttgactgaattgcgggcagaaggctatttaattgcgccgaactatcag
gatgcggatctggtggtggtcaatacctgcggttttatcgatgcggcggttgaagaatcg
cttgatgcgattggtgaggcgctggccgagaacggcaaagtgatcgttaccggctgtctg
ggcgcaaagtcgaatgtggtacagcaggcgcatccaagcgtgctggcggtgaccgggccg
catgcgaccgctgaagtaatggcagcagtgcatgcgcatttgccgaaaccgcatgaccct
tatctcgatctggtgccgccgcagggtatacgtttaacgcctgatcattatgcctatctc
aaaatatccgaaggctgcaatcatcgttgcagtttttgtattatcccttccatgcgcggc
gatctggcaagccgccctgtaggcgaggtgatgcaggaagccgagcgtctggcagaggcc
ggcgtcaaagagctgctggtgatttcgcaggataccagcgcttacggtgtcgatatcaaa
taccgtaccggattctggcagggtcgccccttgaagacacgcatgaccgaattggcagcg
gcattatccgaactggatgtctgggtgcgattgcattatgtttatccttacccgcatgtc
gatgaggtggttccaatgatggcggaaggcaagatattgccttatctggacattccgttt
cagcatgccagcccccgcatcctcaaggccatgaagcgtccggctgcagccgaaaacacc
ctggcgcgcatacgcgcatggcgcgagatttgtcccgagctggtgatacgcagtaccttt
attaccggtttcccgggtgagaccgaagcggatttcgaacagcttatggattttatcgat
gcggccgagctggatcgcgtgggctgctttacctattctgcagtcgagggcgcgtcggcc
aatgccttgcctgatcaggtcccggaggaaatcaaggaagagcgtcgtgcccgcttaatg
gagcggcaagcggatatcagcgcggatcgtcttgcggcgcgtatcggccagacgctcacg
gtgctgattgacgaaattagcgaagaaggcgccataggccgcagctatgccgatgcgccg
gaaatagacggtgttgtcattatcgaagaggctgccggtctggtacccggcgaattcgct
accgttaaaattatcgatagcggcgaacatgatttatggggtgaggctgtctga
DBGET
integrated database retrieval system
