Sulfolobus sp. E11-6: GFS33_02300
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Entry
GFS33_02300 CDS
T07647
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
sulo
Sulfolobus sp. E11-6
Pathway
sulo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sulo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFS33_02300 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulo03021
]
GFS33_02300 (rpoA1)
Enzymes [BR:
sulo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFS33_02300 (rpoA1)
Transcription machinery [BR:
sulo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GFS33_02300 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
QGA67800
UniProt:
A0A5Q0TNI3
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All DBs
Position
386971..389613
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AA seq
880 aa
AA seq
DB search
MSEKNIKGIKFGILSPDEIRKMSVTAIITPDVYDEDGTPIEGSVMDPRLGVIEPGQKCPT
CGNTLGNCPGHFGHIELVRPVIHVGFVKHVYEFLKATCRRCGRVKISEEEIEKYSRIYNA
IKKRWPSAARRLTEYVKKSAMKAQVCPHCGEKQFKIKLEKPYNFYEERKEGVAKLTPSDI
RERLEKIPESDAEILGYDPTTSRPEWMILTVLPVPPITIRPSIMIESGIRAEDDLTHKLV
DIVRINERLKESIDAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGVPEIIARTLTVPERITSWNIEK
LRQFVINGPDKWPGANYVIRPDGRRIDLRYVKDRKELASTLAPGYVVERHLTDGDIVLFN
RQPSLHRISMMAHRVRVLKGLTFRLNLLVCPPYNADFDGDEMNLHVPQSEEAIAEAKEIM
LVHKNIITPRYGGPIIGAAQDYISGAYLLTVKTTLLTKEEAQQILGVADVKIDLGEPAIL
APREYYTGKQVVSAFLPKDFNFHGQANVSSGPRLCKNEDCPHDSYVVIKNGTLLEGVFDK
KAIGNQQPESILHWLIKEYSDEYGKWLMDNLFRVFIRFIELQGFTMRLEDVSLSDDVKKE
IYNEIDRAKVEVDNLIQKYKNGELEPIPGRTLEESLENYILDTLDKLRSTAGDIASKYLD
PFNFAYVMARTGARGSVLNITQMAAMLGQQSVRGERIKRGYMTRTLPHFKPYDISPEARG
FIYSSFRTGLKPTELFFHAAGGREGLVDTAVRTSQSGYMQRRLINALSDLRAEYDGTVRS
LYGEVIQVAYGDDGVFPMYSAHGKTVDVNRIFERVVGWKI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaatataaaaggaataaaatttggaatactttctcctgatgaaataaga
aagatgtcagtgaccgcaataataactccagacgtttatgatgaagacgggactccaata
gaaggtagtgtaatggatcctaggttaggtgtaatagaacctggacagaagtgtcctact
tgtggtaatactttaggtaactgccccggacattttgggcatatagaattagttagacca
gtaattcatgtaggatttgtaaaacatgtatatgaattcctaaaggctacatgtaggaga
tgtggtagagttaaaatttctgaagaagaaatagagaaatattctagaatatataacgca
attaagaaaagatggccatctgcagctaggagattaacagaatatgtgaagaagtctgca
atgaaagctcaagtttgtccacactgtggcgaaaagcaattcaagataaagttagaaaaa
ccgtataatttttacgaagagaggaaagaaggcgtagcaaaactaactccttctgatata
cgagaaagattggagaaaataccagaatccgatgccgaaatattaggttacgatcctaca
accagtaggccagagtggatgatattaactgttcttccagttcctccaattacaattaga
ccttctattatgatagagagtggaataagagctgaagatgacttaactcataagttagtc
gatatagtaaggattaatgaacgattgaaagagagtatagatgcaggagctccacaactg
ataatagaagatttgtgggaccttttacagtatcatgttgcgacttactttgataacgag
attcccggattgcctccttctaaacatagatctggaaggccattaagaacactagcccaa
agattaaaggggaaagaaggtagatttagaggtaatttatctggtaaaagagttgatttc
tcatccagaacagtcatatccccagatcctaatattagtattgatgaagtaggagtccca
gagattatagctagaacacttacagtcccagaaaggataacctcatggaatatagaaaaa
ttaagacagtttgttattaatggtcccgataaatggcctggcgctaattacgtaattaga
ccagatggtagaagaatagatctgagatatgtgaaagatagaaaggagcttgcatcaact
ttagctccaggatatgtagtagaacgtcatctaactgatggagatatagttttgttcaat
aggcaaccttctctgcacagaatttcaatgatggctcatagagttagagtactaaaaggg
ttaacatttaggttaaacttgcttgtatgtccaccatataatgcagacttcgatggagac
gaaatgaacttacacgttccacagtcagaagaggcaatagcggaagccaaggaaataatg
cttgtacataaaaacataataaccccaagatatggtggtcctattataggagctgctcaa
gattatataagtggtgcgtatttactaacagtaaaaactacgttattaactaaagaagaa
gcccagcaaatattaggtgtggcagacgttaaaattgatcttggggaaccggcaatttta
gcacctagagaatattatactggaaaacaagtagtaagtgcttttctgcctaaagatttt
aatttccacggtcaagctaacgttagtagtggccctaggctatgcaagaacgaagattgc
ccgcacgattcgtatgtagtgattaagaacggaacactgttagaaggcgtatttgataaa
aaggctataggaaaccagcaaccagaaagtatcctccattggctgattaaggaatattct
gatgaatatggtaagtggttaatggataacctatttagagtatttattagatttattgaa
ttacaagggtttacgatgagacttgaggacgtttcattaagcgatgatgtaaagaaagaa
atttacaacgaaatagatagggctaaagtggaagtcgataatctaatacaaaagtataaa
aatggagagttagaaccaataccagggagaactttagaggaaagtttagaaaactatatt
cttgataccttagacaaattaagaagcactgccggtgatatagcaagtaaatatctagat
ccatttaatttcgcttacgtaatggcaagaactggagctagaggtagcgtattaaacata
actcagatggccgctatgttaggtcagcaatcagttagaggtgaaagaataaaaagagga
tatatgactagaacattacctcactttaaaccttatgacatctcaccagaagctagaggt
tttatatattcatcattcagaactggtcttaaaccaactgaattattcttccatgctgct
ggaggtagggaaggtctagtggatactgcagtgcgaacttcacagagtggttatatgcaa
agaagattaataaacgcattatcggacttaagggctgaatatgatgggactgtaagaagt
ttatatggcgaggttattcaagttgcgtatggtgacgatggtgtatttcccatgtattca
gctcatggtaaaacggtagatgtaaataggatctttgagagagtcgtggggtggaagata
tga
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